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Sample GSM97625 Query DataSets for GSM97625
Status Public on Apr 29, 2009
Title pneumococcal stimulated PBMC from AIED patient #1
Sample type RNA
 
Source name pneumococcal stimulated PBMC from AIED patient
Organism Homo sapiens
Characteristics PBMC from AIED patient #1 stimulated with pneumococcal antigen
Biomaterial provider A. Vambutas
Treatment protocol pneumococcal antigen (100ul of 23 valent vaccine) stimulated PBMC of AIED patient 1
Extracted molecule total RNA
Extraction protocol affinity spin column
Label biotin
Label protocol Enzo protocol
 
Hybridization protocol Affymetrix protocol to HG-U133A 2.0
Description AIED patient 1 stim PBMC with pneumococcal antigen
Data processing Affymetrix
 
Submission date Feb 20, 2006
Last update date Apr 24, 2009
Contact name Andrea Vambutas
E-mail(s) vambutas@lij.edu
Phone 718-470-7955
Fax 718-470-4281
Organization name Long Island Jewish Medical Center
Department Otolaryngology
Street address 430 Lakeville Road
City New Hyde Park
State/province NY
ZIP/Postal code 11042
Country USA
 
Platform ID GPL571
Series (1)
GSE4277 IL1R2 and glucocorticoid responsiveness in patients with AIED

Data table header descriptions
ID_REF
VALUE ABSOLUTE VALUE OF PNEUMOCOCCAL STIMULATED PBMC FROM AIED PATIENT #1
ABS_CALL
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 2978.1 P 0.000581
AFFX-BioB-M_at 3623.1 P 0.000052
AFFX-BioB-3_at 2533.3 P 0.00006
AFFX-BioC-5_at 9238.6 P 0.000044
AFFX-BioC-3_at 10336.1 P 0.000044
AFFX-BioDn-5_at 18400.4 P 0.000044
AFFX-BioDn-3_at 44482.8 P 0.000044
AFFX-CreX-5_at 87368.8 P 0.000052
AFFX-CreX-3_at 114626.8 P 0.000044
AFFX-DapX-5_at 117.7 A 0.275129
AFFX-DapX-M_at 133.4 A 0.559354
AFFX-DapX-3_at 26.2 A 0.984817
AFFX-LysX-5_at 60.7 A 0.712257
AFFX-LysX-M_at 30.5 A 0.910522
AFFX-LysX-3_at 146.8 A 0.313723
AFFX-PheX-5_at 191.1 A 0.39692
AFFX-PheX-M_at 8.3 A 0.960339
AFFX-PheX-3_at 64.7 A 0.544587
AFFX-ThrX-5_at 35.3 A 0.921998
AFFX-ThrX-M_at 12.6 A 0.834139

Total number of rows: 22277

Table truncated, full table size 603 Kbytes.




Supplementary data files not provided

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