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Sample GSM970862 Query DataSets for GSM970862
Status Public on Jul 20, 2012
Title UW_RnaSeq_Heart_adult-8wks_C57BL/6
Sample type SRA
Source name Heart
Organism Mus musculus
Characteristics lab: UW-m
lab description: Stamatoyannopoulous - University of Washington
datatype: RnaSeq
datatype description: Sequencing analysis of RNA expression
cell: Heart
cell organism: mouse
cell description: Heart
cell sex: M
age: adult-8wks
age description: Adult 8 weeks
strain: C57BL/6
strain description: C57 black 6, the most common inbred strain of laboratory mouse
age: adult-8wks
age description: Adult 8 weeks
labversion: coverage
readtype: 1x50
readtype description: Single 50 nt reads
replicate: 1
strain description: C57 black 6, the most common inbred strain of laboratory mouse
Biomaterial provider 1)LICR lab; 2)CSHL lab
Extracted molecule polyA RNA
Extraction protocol
Library strategy RNA-Seq
Library source transcriptomic
Library selection cDNA
Instrument model AB SOLiD System
Data processing
Submission date Jul 20, 2012
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL10010
Series (2)
GSE39524 RNA-seq from ENCODE/UW
GSE49847 A comparative encyclopedia of DNA elements in the mouse genome
SRA SRX179461
BioSample SAMN01121052
Named Annotation GSM970862_mm9_wgEncodeUwRnaSeqHeartCellPolyaMAdult8wksC57bl6MinusRawRep1.bigWig
Named Annotation GSM970862_mm9_wgEncodeUwRnaSeqHeartCellPolyaMAdult8wksC57bl6MinusRawRep2.bigWig
Named Annotation GSM970862_mm9_wgEncodeUwRnaSeqHeartCellPolyaMAdult8wksC57bl6PlusRawRep1.bigWig
Named Annotation GSM970862_mm9_wgEncodeUwRnaSeqHeartCellPolyaMAdult8wksC57bl6PlusRawRep2.bigWig
Named Annotation GSM970862_mm9_wgEncodeUwRnaSeqHeartCellPolyaMAdult8wksC57bl6SigRep1.bigWig
Named Annotation GSM970862_mm9_wgEncodeUwRnaSeqHeartCellPolyaMAdult8wksC57bl6SigRep2.bigWig

Supplementary file Size Download File type/resource
GSM970862_mm9_wgEncodeUwRnaSeqHeartCellPolyaMAdult8wksC57bl6MinusRawRep1.bigWig 42.7 Mb (ftp)(http) BIGWIG
GSM970862_mm9_wgEncodeUwRnaSeqHeartCellPolyaMAdult8wksC57bl6MinusRawRep2.bigWig 57.4 Mb (ftp)(http) BIGWIG
GSM970862_mm9_wgEncodeUwRnaSeqHeartCellPolyaMAdult8wksC57bl6PlusRawRep1.bigWig 37.5 Mb (ftp)(http) BIGWIG
GSM970862_mm9_wgEncodeUwRnaSeqHeartCellPolyaMAdult8wksC57bl6PlusRawRep2.bigWig 51.6 Mb (ftp)(http) BIGWIG
GSM970862_mm9_wgEncodeUwRnaSeqHeartCellPolyaMAdult8wksC57bl6SigRep1.bigWig 75.2 Mb (ftp)(http) BIGWIG
GSM970862_mm9_wgEncodeUwRnaSeqHeartCellPolyaMAdult8wksC57bl6SigRep2.bigWig 101.9 Mb (ftp)(http) BIGWIG
SRA Run SelectorHelp
Processed data provided as supplementary file
Raw data not provided for this record
Raw data are available in SRA

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