|
| Status |
Public on Aug 27, 2012 |
| Title |
Melanoma Cell Line WM3623 |
| Sample type |
genomic |
| |
|
| Channel 1 |
| Source name |
Melanoma Cell Line WM3623
|
| Organism |
Homo sapiens |
| Characteristics |
genotype: NRAS p.Q61K
cell line: WM3623
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Genomic DNA was extracted using Promega Wizard Genomic DNA Purification Kit following manufacturer's instructions.
|
| Label |
Cy5
|
| Label protocol |
Samples were labeled using Invitrogen's BioPrime Total for Agilent aCGH
|
| |
|
| Channel 2 |
| Source name |
Promega Human Female
|
| Organism |
Homo sapiens |
| Characteristics |
sample type: Female Control DNA from Promega
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Genomic DNA was extracted using Promega Wizard Genomic DNA Purification Kit following manufacturer's instructions.
|
| Label |
Cy3
|
| Label protocol |
Samples were labeled using Invitrogen's BioPrime Total for Agilent aCGH
|
| |
|
| |
| Hybridization protocol |
Hybridization was performed following Agilent's Oligonucleotide Array-Based CGH for Genomic DNA Analysis Protocol
|
| Scan protocol |
Hybridized arrays were scanned using Agilent’s High-Resolution C Scanner
|
| Data processing |
Data was extracted using Agilent Feature Extraction software
|
| |
|
| Submission date |
Jun 26, 2012 |
| Last update date |
Aug 27, 2012 |
| Contact name |
Katherine Nathanson |
| E-mail(s) |
knathans@exchange.upenn.edu
|
| Organization name |
Perelman School of Medicine at the University of Pennsylvania
|
| Street address |
421 Curie Blvd
|
| City |
Philadelphia |
| State/province |
PA |
| ZIP/Postal code |
19103 |
| Country |
USA |
| |
|
| Platform ID |
GPL9777 |
| Series (1) |
| GSE38946 |
Array-based Comparative Genomic Hybridization of Melanoma Cell Lines |
|
