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Sample GSM945223 Query DataSets for GSM945223
Status Public on Jun 07, 2012
Title UW_ChipSeq_WI-38_Input_4OHTAM_20nM_72hr
Sample type SRA
Source name WI-38
Organism Homo sapiens
Characteristics lab: UW
lab description: Stamatoyannopoulous - University of Washington
datatype: ChipSeq
datatype description: Chromatin IP Sequencing
cell: WI-38
cell organism: human
cell description: embryonic lung fibroblast cells, hTERT immortalized, includes Raf1 construct
cell karyotype: normal
cell lineage: endoderm
cell sex: F
antibody: Input
antibody description: Control signal which may be subtracted from experimental raw signal before peaks are called.
treatment: 4OHTAM_20nM_72hr
treatment description: 72 hours with 20 nM 4-hydroxytamoxifen (Stam)
control: std
control description: Standard input signal for most experiments.
controlid: wgEncodeEH002048
labexpid: DS18351
labversion: Bowtie 0.12.7
replicate: 1
Biomaterial provider Dr. Carl Mann, SBIGeM
Treatment protocol 4OHTAM_20nM_72hr
Growth protocol WI38_Stam_protocol.pdf
Extracted molecule genomic DNA
Extraction protocol Instrument model unknown. ("Illumina Genome Analyzer" specified by default). For more information, see
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina Genome Analyzer
Data processing
Submission date Jun 07, 2012
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL9052
Series (1)
GSE35583 Histone Modifications by ChIP-seq from ENCODE/University of Washington
SRA SRX190006
BioSample SAMN01731485
Named Annotation GSM945223_hg19_wgEncodeUwHistoneWi38InputOhtamStdRawRep1.bigWig

Supplementary file Size Download File type/resource
GSM945223_hg19_wgEncodeUwHistoneWi38InputOhtamStdRawRep1.bigWig 181.8 Mb (ftp)(http) BIGWIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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