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Sample GSM945195 Query DataSets for GSM945195
Status Public on Jun 07, 2012
Title UW_ChipSeq_CD20+_RO01794_Input
Sample type SRA
 
Source name CD20+_RO01794
Organism Homo sapiens
Characteristics lab: UW
lab description: Stamatoyannopoulous - University of Washington
datatype: ChipSeq
datatype description: Chromatin IP Sequencing
cell: CD20+_RO01794
cell organism: human
cell description: B cells, African American, draw number 1, newly promoted to tier 2: not in 2011 analysis
cell karyotype: normal
cell lineage: mesoderm
cell sex: F
antibody: Input
antibody description: Control signal which may be subtracted from experimental raw signal before peaks are called.
treatment: None
treatment description: No special treatment or protocol applies
control: std
control description: Standard input signal for most experiments.
controlid: wgEncodeEH002172
labexpid: DS18982
labversion: Bowtie 0.12.7
replicate: 1
Biomaterial provider Rajinder Kaul, UW
Treatment protocol None
Growth protocol CD20+_Stam_protocol.pdf
Extracted molecule genomic DNA
Extraction protocol Instrument model unknown. ("Illumina Genome Analyzer" specified by default). For more information, see http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
 
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina Genome Analyzer
 
Data processing http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwHistone
 
Submission date Jun 07, 2012
Last update date Aug 26, 2014
Contact name ENCODE DCC
E-mail encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platform ID GPL9052
Series (1)
GSE35583 Histone Modifications by ChIP-seq from ENCODE/University of Washington
Relations
SRA SRX189978
BioSample SAMN01731457
Named Annotation GSM945195_hg19_wgEncodeUwHistoneCd20ro01794InputStdRawRep1.bigWig

Supplementary file Size Download File type/resource
GSM945195_hg19_wgEncodeUwHistoneCd20ro01794InputStdRawRep1.bigWig 193.3 Mb (ftp)(http) BIGWIG
Raw data provided as supplementary file
Processed data provided as supplementary file

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