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Sample GSM918763 Query DataSets for GSM918763
Status Public on Apr 19, 2012
Title LICR_ChipSeq_Spleen_Input_adult-8wks
Sample type SRA
 
Source name Spleen
Organism Mus musculus
Characteristics lab: LICR-m
lab description: Ren - Ludwig Institue for Cancer Research
datatype: ChipSeq
datatype description: Chromatin IP Sequencing
biomaterial_type: tissue
donor_id: ENCDO956IXV
cell organism: mouse
tissue_type: Spleen
Sex: M
antibody: Input
antibody description: Control signal which may be subtracted from experimental raw signal before peaks are called.
age: adult-8wks
age description: Adult 8 weeks
age: adult-8wks
age description: Adult 8 weeks
control: std
control description: Standard input signal for most experiments.
controlid: wgEncodeEM001459
labversion: 07/28/10 Lane 7
replicate: 1
softwareversion: ELAND
strain: C57BL/6
strain description: C57 black 6, the most common inbred strain of laboratory mouse
Biomaterial provider 1) LICR lab; 2)Stam Lab
Growth protocol Spleen_Ren_protocol.pdf
Extracted molecule genomic DNA
Extraction protocol http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=mm9&g=wgEncodeLicrTfbs
 
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina Genome Analyzer II
 
Data processing http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=mm9&g=wgEncodeLicrTfbs
 
Submission date Apr 19, 2012
Last update date May 15, 2019
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platform ID GPL9250
Series (2)
GSE36027 Transcription Factor Binding Sites by ChIP-seq from ENCODE/LICR
GSE49847 A comparative encyclopedia of DNA elements in the mouse genome
Relations
SRA SRX143855
BioSample SAMN00862269
Named Annotation GSM918763_mm9_wgEncodeLicrTfbsSpleenInputMAdult8wksC57bl6StdSig.bigWig

Supplementary file Size Download File type/resource
GSM918763_mm9_wgEncodeLicrTfbsSpleenInputMAdult8wksC57bl6StdSig.bigWig 73.0 Mb (ftp)(http) BIGWIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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