|
| Status |
Public on Dec 28, 2012 |
| Title |
Subject_4 [Affymetrix] |
| Sample type |
RNA |
| |
|
| Source name |
Homo sapien lymphoblast
|
| Organism |
Homo sapiens |
| Characteristics |
tissue: Lymphoblast
subject: Subject_4
phenotype: Nicotine Dependent
|
| Extracted molecule |
total RNA |
| Extraction protocol |
RNA isolated using the Ambion PureLink™ RNA Mini Kit following the manufacurer's protocol
|
| Label |
biotin
|
| Label protocol |
Labeled under contract by the University of Iowa DNA Facility
|
| |
|
| Hybridization protocol |
Hybridized under contract by the University of Iowa DNA Facility
|
| Scan protocol |
Scanned under contract by the University of Iowa DNA Facility using the 2 Model 3000 GeneArray scanners
|
| Description |
3_female_ND_3-18-08_s2.CEL
Gene expression data isolated lymphoblasts
|
| Data processing |
Quantile normalized with Partek genomic suite using default settings then z-scored
|
| |
|
| Submission date |
Dec 29, 2011 |
| Last update date |
Dec 28, 2012 |
| Contact name |
Jeffrey Plume |
| E-mail(s) |
jeffrey-plume@uiowa.edu
|
| Organization name |
University of Iowa
|
| Department |
Psychiatry
|
| Lab |
Philibert
|
| Street address |
500 Newton Rd.
|
| City |
Iowa City |
| State/province |
IA |
| ZIP/Postal code |
52246 |
| Country |
USA |
| |
|
| Platform ID |
GPL570 |
| Series (2) |
| GSE34776 |
Expression data from human lymphoblasts [Affymetrix] |
| GSE34779 |
A cross platform genome wide comparison of the relationship of promoter DNA methylation to gene expression |
|
