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Sample GSM854047 Query DataSets for GSM854047
Status Public on Jul 18, 2012
Title GMLPa_rep3
Sample type RNA
 
Source name bone marrow
Organism Mus musculus
Characteristics hematopoiesis population: GMLPa
strain: C57BL/6
age: 3 months
gender: male
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol.
 
Hybridization protocol Following fragmentation, cRNA were hybridized for 16 hr at 45C on GeneChip Mouse 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
Scan protocol GeneChips were scanned using the GeneChip 3000 7G with GCOS version 1.4.0.036.
Description p10_s87.cel
Sample name: 10_87_GMLPa
Data processing The data were normalized using GC-RMA method on Gene Expression Commons system (http://gexc.stanford.edu/)
 
Submission date Dec 27, 2011
Last update date Aug 21, 2014
Contact name Jun Seita
E-mail(s) jseita@stanford.edu
Phone 650-725-5808
Organization name Stanford University
Department Institute for Stem Cell Biology and Regenerative Medicine
Lab Weissman
Street address Lokey Stem Cell Building #G3101, 265 Campus Drive
City Stanford
State/province CA
ZIP/Postal code 94305
Country USA
 
Platform ID GPL1261
Series (1)
GSE34723 Gene Expression Commons: an open platform for absolute gene expression profiling
Relations
Reanalyzed by GSE60597

Data table header descriptions
ID_REF
VALUE log2 GC-RMA signal

Data table
ID_REF VALUE
1415670_at 9.44761
1415671_at 10.2404
1415672_at 11.072
1415673_at 10.1006
1415674_a_at 8.48921
1415675_at 8.31217
1415676_a_at 10.842
1415677_at 8.65863
1415678_at 10.2739
1415679_at 10.1475
1415680_at 10.1989
1415681_at 10.1584
1415682_at 8.71949
1415683_at 10.532
1415684_at 8.76332
1415685_at 7.60222
1415686_at 9.76595
1415687_a_at 9.09589
1415688_at 10.9691
1415689_s_at 10.6239

Total number of rows: 45101

Table truncated, full table size 850 Kbytes.




Supplementary file Size Download File type/resource
GSM854047.cel.gz 3.9 Mb (ftp)(http) CEL
Processed data included within Sample table
Processed data are available on Series record

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