|
| Status |
Public on Dec 10, 2012 |
| Title |
1635 |
| Sample type |
genomic |
| |
|
| Source name |
blood from normal individual
|
| Organism |
Homo sapiens |
| Characteristics |
disease state: normal control
|
| Biomaterial provider |
School of Cancer Sciences, University of Birmingham
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Genomic DNA was extracted using Qiagen QIAamp blood kit.
|
| Label |
biotin
|
| Label protocol |
DNA was subject to whole genome amplification using a Genomiphi kit (GE Healthcare) according to the manufacturer’s instructions and labelled according to Affymetrix standard protocol.
|
| |
|
| Hybridization protocol |
All arrays were washed and stained on an Affymetrix FS450 fluidics station
|
| Scan protocol |
All arrays were scanned using an Affymetrix GeneChip 3000 7G scanner as per Affymetrix procedures.
|
| Data processing |
Genotype analysis was performed using Affymetrix Genotyping Console version 4.0 with the default settings.
|
| |
|
| Submission date |
Dec 19, 2011 |
| Last update date |
Dec 10, 2012 |
| Contact name |
Wenbin Wei |
| E-mail(s) |
Wenbin.Wei2@durham.ac.uk
|
| Organization name |
Durham University
|
| Department |
Biosciences
|
| Street address |
Stockton Road
|
| City |
Durham |
| ZIP/Postal code |
DH1 3LE |
| Country |
United Kingdom |
| |
|
| Platform ID |
GPL3718 |
| Series (1) |
| GSE34573 |
A Global View of the Oncogenic Landscape in Nasopharyngeal Carcinoma:An Integrated Analysis at the Genetic and Expression Levels |
|
