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Sample GSM849031 Query DataSets for GSM849031
Status Public on Dec 14, 2011
Title UW_DnaseDgf_HPAF
Sample type SRA
Source name HPAF
Organism Homo sapiens
Characteristics lab: UW
lab description: Stamatoyannopoulous - University of Washington
datatype: DnaseDgf
datatype description: DNase Digital Footprinting
cell: HPAF
cell organism: human
cell description: pulmonary artery fibroblasts
cell lineage: mesoderm
cell sex: U
labversion: Bowtie 0.12.7
Biomaterial provider ScienCell
Growth protocol HPAF_Stam_protocol.pdf
Extracted molecule genomic DNA
Extraction protocol Instrument model unknown. ("Illumina Genome Analyzer" specified by default). For more information, see
Library strategy DNase-Hypersensitivity
Library source genomic
Library selection DNAse
Instrument model Illumina Genome Analyzer II
Data processing
Submission date Dec 14, 2011
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL9115
Series (1)
GSE26328 DNaseI Digital Genomic Footprinting from ENCODE/University of Washington [Human]
SRA SRX111771
BioSample SAMN00765598
Named Annotation GSM849031_hg19_wgEncodeUwDgfHpafRaw.bigWig
Named Annotation GSM849031_hg19_wgEncodeUwDgfHpafSig.bigWig

Supplementary file Size Download File type/resource
GSM849031_hg19_wgEncodeUwDgfHpafHotspots.broadPeak.gz 3.5 Mb (ftp)(http) BROADPEAK
GSM849031_hg19_wgEncodeUwDgfHpafPk.narrowPeak.gz 2.8 Mb (ftp)(http) NARROWPEAK
GSM849031_hg19_wgEncodeUwDgfHpafRaw.bigWig 324.9 Mb (ftp)(http) BIGWIG
GSM849031_hg19_wgEncodeUwDgfHpafSig.bigWig 429.3 Mb (ftp)(http) BIGWIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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