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Sample GSM849029 Query DataSets for GSM849029
Status Public on Dec 14, 2011
Title UW_DnaseDgf_AoAF
Sample type SRA
Source name AoAF
Organism Homo sapiens
Characteristics lab: UW
lab description: Stamatoyannopoulous - University of Washington
datatype: DnaseDgf
datatype description: DNase Digital Footprinting
cell: AoAF
cell organism: human
cell description: aortic adventitial fibroblast cells
cell karyotype: normal
cell lineage: mesoderm
cell sex: F
labversion: Bowtie 0.12.7
Biomaterial provider Lonza
Growth protocol AoAF_Stam_protocol.pdf
Extracted molecule genomic DNA
Extraction protocol Instrument model unknown. ("Illumina Genome Analyzer" specified by default). For more information, see
Library strategy DNase-Hypersensitivity
Library source genomic
Library selection DNAse
Instrument model Illumina Genome Analyzer II
Data processing
Submission date Dec 14, 2011
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL9115
Series (1)
GSE26328 DNaseI Digital Genomic Footprinting from ENCODE/University of Washington [Human]
SRA SRX111769
BioSample SAMN00765596
Named Annotation GSM849029_hg19_wgEncodeUwDgfAoafRaw.bigWig
Named Annotation GSM849029_hg19_wgEncodeUwDgfAoafSig.bigWig

Supplementary file Size Download File type/resource
GSM849029_hg19_wgEncodeUwDgfAoafHotspots.broadPeak.gz 3.5 Mb (ftp)(http) BROADPEAK
GSM849029_hg19_wgEncodeUwDgfAoafPk.narrowPeak.gz 2.8 Mb (ftp)(http) NARROWPEAK
GSM849029_hg19_wgEncodeUwDgfAoafRaw.bigWig 357.0 Mb (ftp)(http) BIGWIG
GSM849029_hg19_wgEncodeUwDgfAoafSig.bigWig 582.8 Mb (ftp)(http) BIGWIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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