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Sample GSM849028 Query DataSets for GSM849028
Status Public on Dec 14, 2011
Title UW_DnaseDgf_HPF
Sample type SRA
Source name HPF
Organism Homo sapiens
Characteristics lab: UW
lab description: Stamatoyannopoulous - University of Washington
datatype: DnaseDgf
datatype description: DNase Digital Footprinting
cell: HPF
cell organism: human
cell description: pulmonary fibroblasts isolated from lung tissue
cell sex: U
labversion: Bowtie 0.12.7
Biomaterial provider ScienCell
Growth protocol HPF_Stam_protocol.pdf
Extracted molecule genomic DNA
Extraction protocol Instrument model unknown. ("Illumina Genome Analyzer" specified by default). For more information, see
Library strategy DNase-Hypersensitivity
Library source genomic
Library selection DNAse
Instrument model Illumina Genome Analyzer II
Data processing
Submission date Dec 14, 2011
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL9115
Series (1)
GSE26328 DNaseI Digital Genomic Footprinting from ENCODE/University of Washington [Human]
SRA SRX111768
BioSample SAMN00765595
Named Annotation GSM849028_hg19_wgEncodeUwDgfHpfRaw.bigWig
Named Annotation GSM849028_hg19_wgEncodeUwDgfHpfSig.bigWig

Supplementary file Size Download File type/resource
GSM849028_hg19_wgEncodeUwDgfHpfHotspots.broadPeak.gz 3.3 Mb (ftp)(http) BROADPEAK
GSM849028_hg19_wgEncodeUwDgfHpfPk.narrowPeak.gz 2.6 Mb (ftp)(http) NARROWPEAK
GSM849028_hg19_wgEncodeUwDgfHpfRaw.bigWig 351.6 Mb (ftp)(http) BIGWIG
GSM849028_hg19_wgEncodeUwDgfHpfSig.bigWig 525.7 Mb (ftp)(http) BIGWIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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