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Sample GSM849027 Query DataSets for GSM849027
Status Public on Dec 14, 2011
Title UW_DnaseDgf_HRCEpiC
Sample type SRA
Source name HRCEpiC
Organism Homo sapiens
Characteristics lab: UW
lab description: Stamatoyannopoulous - University of Washington
datatype: DnaseDgf
datatype description: DNase Digital Footprinting
cell: HRCEpiC
cell organism: human
cell description: renal cortical epithelial cells
cell karyotype: normal
cell lineage: mesoderm
cell sex: U
labversion: Bowtie 0.12.7
Biomaterial provider Lonza
Growth protocol HRCEpiC_Stam_protocol.pdf
Extracted molecule genomic DNA
Extraction protocol Instrument model unknown. ("Illumina Genome Analyzer" specified by default). For more information, see
Library strategy DNase-Hypersensitivity
Library source genomic
Library selection DNAse
Instrument model Illumina Genome Analyzer II
Data processing
Submission date Dec 14, 2011
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL9115
Series (1)
GSE26328 DNaseI Digital Genomic Footprinting from ENCODE/University of Washington [Human]
SRA SRX111767
BioSample SAMN00765594
Named Annotation GSM849027_hg19_wgEncodeUwDgfHrceRaw.bigWig
Named Annotation GSM849027_hg19_wgEncodeUwDgfHrceSig.bigWig

Supplementary file Size Download File type/resource
GSM849027_hg19_wgEncodeUwDgfHrceHotspots.broadPeak.gz 4.2 Mb (ftp)(http) BROADPEAK
GSM849027_hg19_wgEncodeUwDgfHrcePk.narrowPeak.gz 3.2 Mb (ftp)(http) NARROWPEAK
GSM849027_hg19_wgEncodeUwDgfHrceRaw.bigWig 346.1 Mb (ftp)(http) BIGWIG
GSM849027_hg19_wgEncodeUwDgfHrceSig.bigWig 482.4 Mb (ftp)(http) BIGWIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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