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Sample GSM82 Query DataSets for GSM82
Status Public on Jul 19, 2001
Title Renal cell carcinoma: rccc-1, tumor 1 (part 1 of 2)
Sample type RNA
 
Source name renal clear cell carcinoma (primary tumor)
Organism Homo sapiens
Extracted molecule total RNA
 
Description clinical.stage=I
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=TRUE
survival.months=16
died=FALSE
tumorsize.cm=6
sex=m
age=69
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3624249 reuse=2 date=11-Dec-1999
 
Submission date Jul 19, 2001
Last update date May 27, 2005
Contact name Wolfgang Huber
E-mail(s) w.huber@dkfz.de
Phone +49-6221-424709
Fax +49-6221-423470
URL http://www.dkfz-heidelberg.de/abt0840
Organization name German Cancer Research Center
Department Molecular Genome Analysis
Street address Im Neuenheimer Feld 280
City Heidelberg
ZIP/Postal code 69120
Country Germany
 
Platform ID GPL9
Series (1)
GSE3 Renal Cell Carcinoma Differential Expression

Data table header descriptions
ID_REF
SIGNAL_RAW Mean spot intensity
BKD_RAW 33 percent quantile of intensities of surrounding pixels within a 4x4 block
VALUE SIGNAL_RAW-SIGNAL_BKD

Data table
ID_REF SIGNAL_RAW BKD_RAW VALUE
1 31418 28224 3194
2 23243 28224 -4981
3 20981 28224 -7243
4 4365 28224 -23859
5 213627 28224 185403
6 2315231 28224 2287007
7 1998636 28224 1970412
8 22516 28224 -5708
9 22514 28224 -5710
10 14325 28224 -13899
11 186140 28224 157916
12 31544 28224 3320
13 1773151 28224 1744927
14 9394 28224 -18830
15 12449 28224 -15775
16 24716 28224 -3508
17 10201 16129 -5928
18 20102 16129 3973
19 22401 16129 6272
20 8187 16129 -7942

Total number of rows: 36864

Table truncated, full table size 847 Kbytes.




Supplementary data files not provided

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