NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM790526 Query DataSets for GSM790526
Status Public on Sep 07, 2011
Title HEK293 cells was overexpressed the alternative spliced form of lactoferrin gene (ΔLF)
Sample type RNA
 
Channel 1
Source name Alternatively spliced form (ΔLF) was overexpressed in HEK293 cells
Organism Homo sapiens
Characteristics cell line: HEK293
Growth protocol The Flp-In T-Rex human HEK293 cell cultured in DMEM medium with 10% fetal calf serum and penicillin-streptomycin.
Extracted molecule total RNA
Extraction protocol Total RNA from the MCF-7 cell was isolated using the Trizol (Qiagen, Valencia, CA) according to the supplier’s protocols.
Label Cy5
Label protocol See http://www.phalanxbiotech.com/ for updated protocols
 
Channel 2
Source name Isolated total RNA from HEK293 cells
Organism Homo sapiens
Characteristics cell line: HEK293
Growth protocol The Flp-In T-Rex human HEK293 cell cultured in DMEM medium with 10% fetal calf serum and penicillin-streptomycin.
Extracted molecule total RNA
Extraction protocol Total RNA from the MCF-7 cell was isolated using the Trizol (Qiagen, Valencia, CA) according to the supplier’s protocols.
Label Cy3
Label protocol See http://www.phalanxbiotech.com/ for updated protocols
 
 
Hybridization protocol See http://www.phalanxbiotech.com/ for updated protocols
Scan protocol See http://www.phalanxbiotech.com/ for updated protocols
Data processing See http://www.phalanxbiotech.com/ for updated protocols
 
Submission date Sep 06, 2011
Last update date Sep 07, 2011
Contact name Ju Hee Kim
Organization name Dongguk University
Department Life Science
Lab Molecular Biology
Street address pil-dong 3-ga
City seoul
ZIP/Postal code 100-715
Country South Korea
 
Platform ID GPL6254
Series (1)
GSE31878 Gene expression profiling in HEK293 cells overexpressed lactoferrin gene that has the signal sequence (sLF) or not (ΔLF)

Data table header descriptions
ID_REF
VALUE log2 normalized ratio (Cy5/Cy3)
RATIO normalized ratio (Cy5/Cy3)

Data table
ID_REF VALUE RATIO
PH_hs_0026857 -0.2758 0.826
PH_hs_0026835 -0.1424 0.906
PH_hs_0026854 0.2437 1.184
PH_hs_0026855 0.2738 1.209
PH_hs_0026838 -0.0380 0.974
PH_hs_0026767 -0.6484 0.638
PH_hs_0026836 0.1583 1.116
PH_hs_0026837 -0.6552 0.635
PH_hs_0026764 -0.2934 0.816
PH_hs_0026845 0.1661 1.122
PH_hs_0026771 0.0607 1.043
PH_hs_0026842 0.5705 1.485
PH_hs_0026843 -0.0454 0.969
PH_hs_0026770 0.0538 1.038
PH_hs_0026769 0.3057 1.236
PH_hs_0026768 0.0854 1.061
PH_hs_0026858 0.2449 1.185
PH_hs_0026772 0.0718 1.051
PH_hs_0026761 -0.3456 0.787
PH_hs_0026774 0.4179 1.336

Total number of rows: 18367

Table truncated, full table size 487 Kbytes.




Supplementary file Size Download File type/resource
GSM790526_Phx0604043659.txt.gz 2.9 Mb (ftp)(http) TXT
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap