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Sample GSM790525 Query DataSets for GSM790525
Status Public on Sep 07, 2011
Title HEK293 cells was overexpressed the secreted form of lactoferrin gene (sLF)
Sample type RNA
 
Channel 1
Source name Secreted form (sLF) was overexpressed in HEK293 cells
Organism Homo sapiens
Characteristics cell line: HEK293
Growth protocol The Flp-In T-Rex human HEK293 cell cultured in DMEM medium with 10% fetal calf serum and penicillin-streptomycin.
Extracted molecule total RNA
Extraction protocol Total RNA from the MCF-7 cell was isolated using the Trizol (Qiagen, Valencia, CA) according to the supplier’s protocols.
Label Cy5
Label protocol See http://www.phalanxbiotech.com/ for updated protocols
 
Channel 2
Source name Isolated total RNA from HEK293 cells
Organism Homo sapiens
Characteristics cell line: HEK293
Growth protocol The Flp-In T-Rex human HEK293 cell cultured in DMEM medium with 10% fetal calf serum and penicillin-streptomycin.
Extracted molecule total RNA
Extraction protocol Total RNA from the MCF-7 cell was isolated using the Trizol (Qiagen, Valencia, CA) according to the supplier’s protocols.
Label Cy3
Label protocol See http://www.phalanxbiotech.com/ for updated protocols
 
 
Hybridization protocol See http://www.phalanxbiotech.com/ for updated protocols
Scan protocol See http://www.phalanxbiotech.com/ for updated protocols
Data processing See http://www.phalanxbiotech.com/ for updated protocols
 
Submission date Sep 06, 2011
Last update date Sep 07, 2011
Contact name Ju Hee Kim
Organization name Dongguk University
Department Life Science
Lab Molecular Biology
Street address pil-dong 3-ga
City seoul
ZIP/Postal code 100-715
Country South Korea
 
Platform ID GPL6254
Series (1)
GSE31878 Gene expression profiling in HEK293 cells overexpressed lactoferrin gene that has the signal sequence (sLF) or not (ΔLF)

Data table header descriptions
ID_REF
VALUE log2 normalized ratio (Cy5/Cy3)
RATIO normalized ratio (Cy5/Cy3)

Data table
ID_REF VALUE RATIO
PH_hs_0026857 -0.2076 0.866
PH_hs_0026835 0.2253 1.169
PH_hs_0026854 0.0786 1.056
PH_hs_0026855 0.2228 1.167
PH_hs_0026838 -0.5023 0.706
PH_hs_0026767 -0.3111 0.806
PH_hs_0026836 -0.6215 0.65
PH_hs_0026837 -0.3865 0.765
PH_hs_0026764 -0.2723 0.828
PH_hs_0026845 -0.0189 0.987
PH_hs_0026771 0.0895 1.064
PH_hs_0026842 0.2963 1.228
PH_hs_0026843 0.2558 1.194
PH_hs_0026770 0.2265 1.17
PH_hs_0026769 0.1493 1.109
PH_hs_0026768 -0.0847 0.943
PH_hs_0026858 0.1296 1.094
PH_hs_0026772 -0.2328 0.851
PH_hs_0026761 0.0014 1.001
PH_hs_0026774 0.1362 1.099

Total number of rows: 18367

Table truncated, full table size 488 Kbytes.




Supplementary file Size Download File type/resource
GSM790525_Phx0602021907.txt.gz 3.0 Mb (ftp)(http) TXT
Processed data included within Sample table

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