|
| Status |
Public on Jul 23, 2011 |
| Title |
haploid ES cell line HAP2 p18 vs male somatic C57B/6 gDNA |
| Sample type |
genomic |
| |
|
| Channel 1 |
| Source name |
gDNA from HAP2
|
| Organism |
Mus musculus |
| Characteristics |
strain: F1 CBAxB6
dna source: haploid ES cells
|
| Treatment protocol |
ES cells were established and cultured in 2i medium
|
| Growth protocol |
male kidney
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
gDNA was extracted using the Quiagen Gentra Puregene Kit
|
| Label |
Cy3
|
| Label protocol |
sample processing, labelling and data processing were performed by a commercial provider; Imagenes, Berlin
|
| |
|
| Channel 2 |
| Source name |
C57B/6 male kidney control
|
| Organism |
Mus musculus |
| Characteristics |
strain: C57B/6
dna source: male somatic kidney
|
| Treatment protocol |
kidney was collected from an inbred C57B/6 mouse
|
| Growth protocol |
gDNA extracted from male kidney
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
gDNA was extracted using the Quiagen Gentra Puregene Kit
|
| Label |
Cy5
|
| Label protocol |
labelling were performed by a commercial provider; Imagenes, Berlin
|
| |
|
| |
| Hybridization protocol |
hybridization were performed by a commercial provider; Imagenes, Berlin
|
| Scan protocol |
scanning were performed by a commercial provider; Imagenes, Berlin
|
| Description |
CNV analysis of HAP2 haploid ES cell line vs C57B/6 male
|
| Data processing |
data processing were performed by a commercial provider; Imagenes, Berlin
|
| |
|
| Submission date |
Jul 18, 2011 |
| Last update date |
Apr 25, 2012 |
| Contact name |
Martin Leeb |
| E-mail(s) |
martin.leeb@univie.ac.at
|
| Organization name |
University of Vienna
|
| Department |
Max Perutz Labs
|
| Street address |
Dr.-Bohr-Gasse 9/3
|
| City |
Vienna |
| ZIP/Postal code |
1030 |
| Country |
Austria |
| |
|
| Platform ID |
GPL10989 |
| Series (2) |
| GSE30749 |
CGH analysis of haploid ES cells |
| GSE30879 |
Expression and CGH analysis of haploid ES cells |
|
