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Sample GSM762915 Query DataSets for GSM762915
Status Public on Jul 23, 2011
Title haploid ESC HAP2 p21
Sample type RNA
 
Source name haploid ES cell line
Organism Mus musculus
Characteristics strain: F1 CBAxB6
cell type: haploid ES cell
Treatment protocol RNA was extracted at d2 after passaging
Growth protocol mouse ES cells cultured in 2i medium
Extracted molecule total RNA
Extraction protocol RNA was extraced using the Quiagen Rneasy Kit
Label biotin
Label protocol labelling were performed by Imagenes, Berlin
 
Hybridization protocol sample processing, labelling and primary data analysis were performed by Imagenes, Berlin
Scan protocol scanning were performed by Imagenes, Berlin
Description gene expression profile of a haploid ES cell line
Data processing data were normalized using the RMA algorithm.
 
Submission date Jul 18, 2011
Last update date Jul 23, 2011
Contact name Martin Leeb
E-mail(s) martin.leeb@univie.ac.at
Organization name University of Vienna
Department Max Perutz Labs
Street address Dr.-Bohr-Gasse 9/3
City Vienna
ZIP/Postal code 1030
Country Austria
 
Platform ID GPL1261
Series (2)
GSE30744 Expression analysis of haploid and diploid ES cells in 2i medium
GSE30879 Expression and CGH analysis of haploid ES cells

Data table header descriptions
ID_REF
VALUE Quantification

Data table
ID_REF VALUE
AFFX-BioB-5_at 8.45825
AFFX-BioB-M_at 8.79621
AFFX-BioB-3_at 8.61888
AFFX-BioC-5_at 9.58705
AFFX-BioC-3_at 9.97169
AFFX-BioDn-5_at 10.9363
AFFX-BioDn-3_at 11.9485
AFFX-CreX-5_at 13.3012
AFFX-CreX-3_at 13.6799
AFFX-DapX-5_at 5.94399
AFFX-DapX-M_at 7.42452
AFFX-DapX-3_at 7.69775
AFFX-LysX-5_at 3.99654
AFFX-LysX-M_at 4.39208
AFFX-LysX-3_at 5.62984
AFFX-PheX-5_at 4.82143
AFFX-PheX-M_at 5.15189
AFFX-PheX-3_at 6.86814
AFFX-ThrX-5_at 5.86393
AFFX-ThrX-M_at 5.33417

Total number of rows: 45101

Table truncated, full table size 850 Kbytes.




Supplementary file Size Download File type/resource
GSM762915.CEL.gz 3.8 Mb (ftp)(http) CEL
GSM762915.chp.gz 311.8 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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