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Sample GSM749765 Query DataSets for GSM749765
Status Public on Jun 29, 2011
Title Stam_GM12872_Input_1
Sample type SRA
 
Source name GM12872
Organism Homo sapiens
Characteristics cell: GM12872
cell organism: Human
cell description: B-Lymphocyte, Lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1459, Treatment: Epstein-Barr Virus transformed
cell karyotype: unknown
cell lineage: mesoderm
cell sex: M
antibody: Input
replicate: 1
Biomaterial provider Corriell; http://ccr.coriell.org/Sections/Search/Sample_Detail.aspx?Ref=GM12872
Growth protocol Cells were grown according to ENCODE cell culture protocols: http://genome.ucsc.edu/ENCODE/protocols/cells/human/UW_Stam:GM12872_Stam_protocol.pdf
Extracted molecule genomic DNA
Extraction protocol For extraction protocol details see: http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
 
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina Genome Analyzer II
 
Data processing For data processing details see: http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwTfbs
 
Submission date Jun 28, 2011
Last update date May 15, 2019
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platform ID GPL9115
Series (1)
GSE30263 CTCF Binding Sites by ChIP-seq from ENCODE/University of Washington
Relations
SRA SRX080428
BioSample SAMN00631445
Named Annotation GSM749765_hg19_wgEncodeUwTfbsGm12872InputStdRawRep1.bigWig

Supplementary file Size Download File type/resource
GSM749765_hg19_wgEncodeUwTfbsGm12872InputStdAlnRep1.bam 629.0 Mb (ftp)(http) BAM
GSM749765_hg19_wgEncodeUwTfbsGm12872InputStdRawRep1.bigWig 144.0 Mb (ftp)(http) BIGWIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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