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|
| Status |
Public on Sep 21, 2005 |
| Title |
Treated 4, 72 h |
| Sample type |
RNA |
| |
|
| Source name |
Isolated epithelial cells from human fetal lung at 13-20 wk gestation
|
| Organism |
Homo sapiens |
| Characteristics |
Human fetal lungs 13-20 wks gestation, both genders
|
| Treatment protocol |
DCI (dexamethasone 10nM, 8-Bromo cyclic AMP 10µM, isobutylxanthine 10µM) added days 3-6 (72 h exposure) prior to extract preparation
|
| Extracted molecule |
total RNA |
| Label |
Biotin-labeled cRNA
|
| |
|
| Description |
RNA extracted with RNA STAT-60 and checked with Agilent gel
|
| Data processing |
Affymetrix algorithms (MAS 5.0)
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| |
|
| Submission date |
Sep 16, 2005 |
| Last update date |
Sep 20, 2005 |
| Contact name |
Philip L Ballard |
| E-mail(s) |
ballardp@peds.ucsf.edu
|
| Phone |
415 476-4193
|
| Organization name |
UCSF
|
| Department |
Neonatology
|
| Lab |
HSE 1421
|
| Street address |
513 Parnassus St
|
| City |
San Francisco |
| State/province |
CA |
| ZIP/Postal code |
94194 |
| Country |
USA |
| |
|
| Platform ID |
GPL96 |
| Series (2) |
| GSE3306 |
Gene induction during differentiation of human pulmonary type II cells in vitro |
| GSE19699 |
Gene Expression in Human Lung Type II Cells |
|
| Data table header descriptions |
| ID_REF |
|
| VALUE |
Signal, sample 8, DCI 72 h |
| ABS_CALL |
Presence, Marginal or Absence of gene transcript in sample (P=p-value of 0.00-0.04, M=0.04-0.06, A=0.06-0.1) |
| Data table |
| ID_REF |
VALUE |
ABS_CALL |
| 1007_s_at |
777.4 |
P |
| 1053_at |
58.6 |
P |
| 117_at |
28.1 |
A |
| 121_at |
269.3 |
P |
| 1255_g_at |
14.5 |
A |
| 1294_at |
100.2 |
P |
| 1316_at |
34.9 |
P |
| 1320_at |
81.7 |
P |
| 1405_i_at |
1.5 |
A |
| 1431_at |
26.5 |
P |
| 1438_at |
86.2 |
P |
| 1487_at |
117 |
P |
| 1494_f_at |
66.5 |
P |
| 1598_g_at |
870.2 |
P |
| 160020_at |
152.4 |
P |
| 1729_at |
141.3 |
P |
| 177_at |
29 |
A |
| 1773_at |
57.9 |
M |
| 179_at |
330.7 |
P |
| 1861_at |
94.2 |
P |
Total number of rows: 22283
Table truncated, full table size 390 Kbytes.
| Supplementary data files not provided |
| Processed data included within Sample table |
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