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Sample GSM736613 Query DataSets for GSM736613
Status Public on Jun 03, 2011
Title Stam_WI-38_1
Sample type SRA
Source name WI-38
Organism Homo sapiens
Characteristics cell: WI-38
cell organism: human
cell description: Embryonic Lung Fibroblast Cells, hTERT immortalized, includes Raf1 construct
cell karyotype: Normal (RAF)
cell lineage: Fibroblast
cell sex: F
replicate: 1
Biomaterial provider Dr. Carl Mann, SBIGeM
Growth protocol Cells were grown according to ENCODE cell culture protocols:
Extracted molecule genomic DNA
Extraction protocol For extraction protocol details see:
Library strategy DNase-Hypersensitivity
Library source genomic
Library selection DNAse
Instrument model Illumina Genome Analyzer II
Data processing For data processing details see:
Submission date Jun 02, 2011
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL9115
Series (2)
GSE29692 DNaseI Hypersensitivity by Digital DNaseI from ENCODE/University of Washington
GSE51336 Mouse regulatory DNA landscapes reveal global principles of cis-regulatory evolution
Reanalyzed by GSE53962
Reanalyzed by GSE54296
Reanalyzed by GSE59016
SRA SRX069206
BioSample SAMN00622331
Named Annotation GSM736613_hg19_wgEncodeUwDnaseWi38RawRep1.bigWig

Supplementary file Size Download File type/resource
GSM736613_hg19_wgEncodeUwDnaseWi38AlnRep1.bam 979.9 Mb (ftp)(http) BAM
GSM736613_hg19_wgEncodeUwDnaseWi38HotspotsRep1.broadPeak.gz 2.6 Mb (ftp)(http) BROADPEAK
GSM736613_hg19_wgEncodeUwDnaseWi38PkRep1.narrowPeak.gz 1.8 Mb (ftp)(http) NARROWPEAK
GSM736613_hg19_wgEncodeUwDnaseWi38RawRep1.bigWig 101.0 Mb (ftp)(http) BIGWIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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