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Sample GSM736556 Query DataSets for GSM736556
Status Public on Jun 03, 2011
Title Stam_NHEK_2
Sample type SRA
Source name NHEK
Organism Homo sapiens
Characteristics cell: NHEK
cell organism: Human
cell description: Normal Human Epidermal Keratinocytes
cell karyotype: normal
cell lineage: ectoderm
cell sex: F
replicate: 2
Biomaterial provider Lonza
Growth protocol Cells were grown according to ENCODE cell culture protocols:
Extracted molecule genomic DNA
Extraction protocol For extraction protocol details see:
Library strategy DNase-Hypersensitivity
Library source genomic
Library selection DNAse
Instrument model Illumina Genome Analyzer II
Data processing For data processing details see:
Submission date Jun 02, 2011
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL9115
Series (2)
GSE29692 DNaseI Hypersensitivity by Digital DNaseI from ENCODE/University of Washington
GSE51334 DNA replication-timing boundaries separate stable chromosome domains with cell-type-specific functions
Reanalyzed by GSE53962
Reanalyzed by GSE54296
Reanalyzed by GSE59016
SRA SRX069149
BioSample SAMN00622274
Named Annotation GSM736556_hg19_wgEncodeUwDnaseNhekRawRep2.bigWig

Supplementary file Size Download File type/resource
GSM736556_hg19_wgEncodeUwDnaseNhekAlnRep2.bam 1.6 Gb (ftp)(http) BAM
GSM736556_hg19_wgEncodeUwDnaseNhekHotspotsRep2.broadPeak.gz 4.5 Mb (ftp)(http) BROADPEAK
GSM736556_hg19_wgEncodeUwDnaseNhekPkRep2.narrowPeak.gz 1.7 Mb (ftp)(http) NARROWPEAK
GSM736556_hg19_wgEncodeUwDnaseNhekRawRep2.bigWig 217.9 Mb (ftp)(http) BIGWIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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