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Sample GSM736546 Query DataSets for GSM736546
Status Public on Jun 03, 2011
Title Stam_NHDF-neo_2
Sample type SRA
Source name NHDF-neo
Organism Homo sapiens
Characteristics cell: NHDF-neo
cell organism: Human
cell description: Neonatal Human Dermal Fibroblasts
cell lineage: mesoderm
cell sex: U
replicate: 2
Biomaterial provider Lonza
Growth protocol Cells were grown according to ENCODE cell culture protocols:
Extracted molecule genomic DNA
Extraction protocol For extraction protocol details see:
Library strategy DNase-Hypersensitivity
Library source genomic
Library selection DNAse
Instrument model Illumina Genome Analyzer II
Data processing For data processing details see:
Submission date Jun 02, 2011
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL9115
Series (1)
GSE29692 DNaseI Hypersensitivity by Digital DNaseI from ENCODE/University of Washington
Reanalyzed by GSE53962
Reanalyzed by GSE54296
Reanalyzed by GSE59016
SRA SRX069139
BioSample SAMN00622264
Named Annotation GSM736546_hg19_wgEncodeUwDnaseNhdfneoRawRep2.bigWig

Supplementary file Size Download File type/resource
GSM736546_hg19_wgEncodeUwDnaseNhdfneoAlnRep2.bam 1.5 Gb (ftp)(http) BAM
GSM736546_hg19_wgEncodeUwDnaseNhdfneoHotspotsRep2.broadPeak.gz 2.8 Mb (ftp)(http) BROADPEAK
GSM736546_hg19_wgEncodeUwDnaseNhdfneoPkRep2.narrowPeak.gz 1.9 Mb (ftp)(http) NARROWPEAK
GSM736546_hg19_wgEncodeUwDnaseNhdfneoRawRep2.bigWig 139.7 Mb (ftp)(http) BIGWIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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