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Sample GSM733731 Query DataSets for GSM733731
Status Public on Jun 02, 2011
Title Bernstein_NHLF_Control
Sample type SRA
Source name NHLF
Organism Homo sapiens
Characteristics donor_id: ENCDO156MSV,ENCDO269AAA
biomaterial_type: primary cell
cell_type: fibroblast of lung
lab: Broad
lab description: Bernstein - Broad Institute
datatype: ChipSeq
datatype description: Chromatin IP Sequencing
cell organism: human
cell description: lung fibroblasts
cell karyotype: normal
cell lineage: endoderm
antibody: Input
antibody description: Control signal which may be subtracted from experimental raw signal before peaks are called.
treatment: None
treatment description: No special treatment or protocol applies
control: std
control description: Standard input signal for most experiments.
controlid: wgEncodeEH000105
replicate: 1,2
Biomaterial provider Lonza
Growth protocol NHLF_Bernstein_protocol.pdf
Extracted molecule genomic DNA
Extraction protocol For extraction protocol details see:
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina Genome Analyzer IIx
Data processing For data processing details see:
Submission date May 27, 2011
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL10999
Series (1)
GSE29611 Histone Modifications by ChIP-seq from ENCODE/Broad Institute
Reanalyzed by GSM936086
SRA SRX067482
BioSample SAMN00622152
Named Annotation GSM733731_hg19_wgEncodeBroadHistoneNhlfControlStdSig.bigWig

Supplementary file Size Download File type/resource
GSM733731_hg19_wgEncodeBroadHistoneNhlfControlStdAlnRep1.bam 251.8 Mb (ftp)(http) BAM
GSM733731_hg19_wgEncodeBroadHistoneNhlfControlStdAlnRep2.bam 400.9 Mb (ftp)(http) BAM
GSM733731_hg19_wgEncodeBroadHistoneNhlfControlStdSig.bigWig 347.9 Mb (ftp)(http) BIGWIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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