|
| Status |
Public on Jun 01, 2011 |
| Title |
BT6 |
| Sample type |
RNA |
| |
|
| Source name |
Large airway epithelial cells
|
| Organism |
Homo sapiens |
| Characteristics |
cell type: large airway epithelial cells
disease state: Lung Cancer
gender: M
age: 76
packyears: 75-100
smoking status: Former
years passed since quitting: 7
cancer stage: IB
histology: Squamous Cell Carcinoma
|
| Extracted molecule |
total RNA |
| Extraction protocol |
RNA was extracted by using TRIzol Reagent (Invitrogen) according to the manufacturer's protocol
|
| Label |
Biotin
|
| Label protocol |
Affymetrix Suggested Protocol
|
| |
|
| Hybridization protocol |
Affymetrix Suggested Protocol
|
| Scan protocol |
Affymetrix Suggested Protocol
|
| Data processing |
RMA (Robust Multichip Average) generated expression value using Ensembl v58 CDF file
|
| |
|
| Submission date |
Apr 25, 2011 |
| Last update date |
Jun 01, 2011 |
| Contact name |
Avrum Spira |
| E-mail(s) |
aspira@lung.bumc.bu.edu
|
| Phone |
617-638-4860
|
| Fax |
617-536-8093
|
| URL |
http://www.pulmonomics.org
|
| Organization name |
Boston University Medical Center
|
| Department |
Pulmonary and Critical Care Medicine
|
| Lab |
Pulmonomics Lab
|
| Street address |
715 Albany Street, R304
|
| City |
Boston |
| State/province |
MA |
| ZIP/Postal code |
02118 |
| Country |
USA |
| |
|
| Platform ID |
GPL13447 |
| Series (2) |
| GSE28835 |
Large airway epithelial cells from cigarette smokers with and without lung cancer undergoing flexible bronchoscopy in the operating room for resection of a suspicious lung nodule |
| GSE29007 |
Human Large Airway Epithelial Cells from healthy never and current smoker and smokers with and without lung cancer |
|
