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Sample GSM71156 Query DataSets for GSM71156
Status Public on Aug 25, 2005
Title Morex stress and unstress replicate 3
Sample type RNA
Source name whole seedling
Organism Hordeum vulgare
Characteristics cv. Morex
drought stress and unstressed
Extracted molecule total RNA
Extraction protocol Five seedlings were used for RNA extraction
Label biotin
Label protocol Approximately 8 µg of total RNA was processed to produce biotinylated cRNA targets.
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description drought stress and unstressed
Data processing GCOS 1.2
Submission date Aug 19, 2005
Last update date Aug 25, 2005
Contact name xinping cui
Phone 9518272563
Fax 9518273286
Organization name University of California,Riverside
Department Statistics
Street address Department of Statistics, University of California, Riverside
City Riverside
State/province CA
ZIP/Postal code 92521
Country USA
Platform ID GPL1340
Series (1)
GSE3170 Barley single feature polymorphisms and drought stress gene expression

Data table header descriptions
VALUE GCOS1.2-calculated Signal intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
AFFX-BioB-5_at 174.3 P 0.00844
AFFX-BioB-M_at 122.1 P 0.000389
AFFX-BioB-3_at 77.1 P 0.000857
AFFX-BioC-5_at 260.8 P 0.000095
AFFX-BioC-3_at 382.5 P 0.000052
AFFX-BioDn-5_at 618.1 P 0.000044
AFFX-BioDn-3_at 1881.2 P 0.00011
AFFX-CreX-5_at 3437.9 P 0.000044
AFFX-CreX-3_at 6367.9 P 0.000052
AFFX-DapX-5_at 273.7 P 0.00007
AFFX-DapX-M_at 826.9 P 0.000127
AFFX-DapX-3_at 2008 P 0.000044
AFFX-LysX-5_at 67.1 P 0.000258
AFFX-LysX-M_at 107.5 P 0.006871
AFFX-LysX-3_at 255.4 P 0.000169
AFFX-PheX-5_at 113.2 P 0.000446
AFFX-PheX-M_at 111 P 0.002275
AFFX-PheX-3_at 224.4 P 0.000095
AFFX-ThrX-5_at 123.7 P 0.000509
AFFX-ThrX-M_at 192.4 P 0.00007

Total number of rows: 22840

Table truncated, full table size 705 Kbytes.

Supplementary file Size Download File type/resource
GSM71156.CEL.gz 3.3 Mb (ftp)(http) CEL
Raw data provided as supplementary file

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