|
| Status |
Public on Aug 18, 2022 |
| Title |
SUBJECT 01 Timepoint 1 |
| Sample type |
RNA |
| |
|
| Source name |
biopsy
|
| Organism |
Homo sapiens |
| Characteristics |
subject: 1
time: 1
treatment: Akkermansia
|
| Treatment protocol |
Perfusion with Akkermansia muciniphila or placebo
|
| Growth protocol |
Healthy human study participants
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Trizol extraction of total RNA was performed according to the manufacturer's instructions.
|
| Label |
biotin
|
| Label protocol |
Ambion MessageAmp IIbiotin enhanced singleround amplification kit
|
| |
|
| Hybridization protocol |
Affymetrix GeneChip 3000 7G
|
| Scan protocol |
Affymetrix GeneChip 3000 7G
|
| Data processing |
R Bioconductor “oligo” and “pd.hugene.1.1.st.v1” packages
|
| |
|
| Submission date |
Aug 17, 2022 |
| Last update date |
Aug 18, 2022 |
| Contact name |
Robert-Jan Brummer |
| Organization name |
Örebro University
|
| Department |
School of Medical Sciences
|
| Street address |
Södra Grev Rosengatan 42 A
|
| City |
Örebro |
| ZIP/Postal code |
70362 |
| Country |
Sweden |
| |
|
| Platform ID |
GPL11532 |
| Series (1) |
| GSE211506 |
Gene expression data from Akkermansia perfusion trial |
|
