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Sample GSM617625 Query DataSets for GSM617625
Status Public on Nov 05, 2010
Title Prostate cancer primary tumor PR43
Sample type RNA
 
Source name Human prostate cancer
Organism Homo sapiens
Characteristics tissue: Prostate cancer primary tumor
recurrence status: Non-Recurrent
Extracted molecule total RNA
Extraction protocol RNeasy kit
Label biotin
Label protocol Biotinylated cRNA was prepared according to standard Affymetrix protocols
 
Hybridization protocol Following fragmentation, cRNA was hybridized to one U133A Affymetrix GeneChip.
Scan protocol GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
Description PR43
Prostate cancer primary tumor
Data processing The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
 
Submission date Nov 04, 2010
Last update date Nov 04, 2010
Contact name Steve Goodison
Organization name M. D. Anderson Cancer Center Orlando
Department Cancer Research Institute
Street address 6900 Lake Nona Blvd
City Orlando
ZIP/Postal code 32827
Country USA
 
Platform ID GPL96
Series (1)
GSE25136 Optimizing molecular signatures for prostate cancer recurrence

Data table header descriptions
ID_REF
VALUE MAS5.0 signal intensity

Data table
ID_REF VALUE
1007_s_at 551.3
1053_at 1475.5
117_at 445.5
121_at 1352.2
1255_g_at 1230.7
1294_at 1511.2
1316_at 7777.7
1320_at 14028
1405_i_at 21237.5
1431_at 5
1438_at 19
1487_at 3.3
1494_f_at 2.7
1598_g_at 25.5
160020_at 5.8
1729_at 2
1773_at 3.3
177_at 73.6
179_at 7.4
1861_at 4.5

Total number of rows: 22283

Table truncated, full table size 358 Kbytes.




Supplementary file Size Download File type/resource
GSM617625.CEL.gz 3.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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