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Sample GSM617606 Query DataSets for GSM617606
Status Public on Nov 05, 2010
Title Prostate cancer primary tumor PR21
Sample type RNA
 
Source name Human prostate cancer
Organism Homo sapiens
Characteristics tissue: Prostate cancer primary tumor
recurrence status: Recurrent
Extracted molecule total RNA
Extraction protocol RNeasy kit
Label biotin
Label protocol Biotinylated cRNA was prepared according to standard Affymetrix protocols
 
Hybridization protocol Following fragmentation, cRNA was hybridized to one U133A Affymetrix GeneChip.
Scan protocol GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
Description PR21
Prostate cancer primary tumor
Data processing The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
 
Submission date Nov 04, 2010
Last update date Nov 04, 2010
Contact name Steve Goodison
Organization name M. D. Anderson Cancer Center Orlando
Department Cancer Research Institute
Street address 6900 Lake Nona Blvd
City Orlando
ZIP/Postal code 32827
Country USA
 
Platform ID GPL96
Series (1)
GSE25136 Optimizing molecular signatures for prostate cancer recurrence

Data table header descriptions
ID_REF
VALUE MAS5.0 signal intensity

Data table
ID_REF VALUE
1007_s_at 1223.5
1053_at 3274.6
117_at 1268.9
121_at 2782.8
1255_g_at 2498.4
1294_at 2950
1316_at 15556.1
1320_at 27374.5
1405_i_at 42135.8
1431_at 20.4
1438_at 8.5
1487_at 8.7
1494_f_at 37.3
1598_g_at 13.9
160020_at 4.3
1729_at 4.5
1773_at 9.1
177_at 135.5
179_at 14.2
1861_at 49

Total number of rows: 22283

Table truncated, full table size 361 Kbytes.




Supplementary file Size Download File type/resource
GSM617606.CEL.gz 3.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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