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Sample GSM606854 Query DataSets for GSM606854
Status Public on Jun 15, 2011
Title hLCR knock-in fetal liver expression replicate 1
Sample type RNA
 
Source name hLCR knock-in fetal liver expression
Organism Mus musculus
Characteristics genetic background: FVB
tissue: fetal liver
age: E14.5
genotype: hLCR knock-in
Extracted molecule polyA RNA
Extraction protocol affymetrix one-cycle cDNA synthesis protocol was used
Label biotin
Label protocol Labeling was performed according to Affymetrix protocol
 
Hybridization protocol Hybridization was performed according to Affymetrix protocol
Scan protocol Scanning was performed according to Affymetrix protocol
Data processing Data was normalized using rma in the affy Bioconductor package
 
Submission date Oct 11, 2010
Last update date Jun 15, 2011
Contact name Elzo de Wit
Phone +31 30 2121 800
Organization name Hubrecht Institute
Street address Uppsalalaan 8
City Utrecht
ZIP/Postal code 3584 CT
Country Netherlands
 
Platform ID GPL1261
Series (1)
GSE24614 Variegated gene expression caused by cell-specific long-range DNA interactions

Data table header descriptions
ID_REF
VALUE RMA normalized log2 intensities

Data table
ID_REF VALUE
1415670_at 8.07680734708267
1415671_at 9.46420221805856
1415672_at 10.381915266182
1415673_at 9.3241770715989
1415674_a_at 8.91878018500778
1415675_at 8.00935345834583
1415676_a_at 10.8822597489748
1415677_at 7.6509389656201
1415678_at 9.439049154344
1415679_at 10.1502098002155
1415680_at 9.4965178536336
1415681_at 8.8204126687615
1415682_at 10.8486101214260
1415683_at 10.3173952444628
1415684_at 7.26364594407114
1415685_at 8.2558081355544
1415686_at 8.57075881840055
1415687_a_at 9.4797771442988
1415688_at 9.31060927380481
1415689_s_at 7.8442951290091

Total number of rows: 45101

Table truncated, full table size 1247 Kbytes.




Supplementary file Size Download File type/resource
GSM606854_Daan_2.5__LCR_AS___2_.CEL.gz 3.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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