|
| Status |
Public on Oct 24, 2022 |
| Title |
SA-11018-20 LN SUBMAN #3 BA71DCD2 |
| Sample type |
SRA |
| |
|
| Source name |
Cell suspension
|
| Organism |
Sus scrofa |
| Characteristics |
status: control
tissue: submandibular lymph node cells
|
| Extracted molecule |
total RNA |
| Extraction protocol |
10XChromium-Seq
10X Chromium 3' RNA-seq
|
| |
|
| Library strategy |
RNA-Seq |
| Library source |
transcriptomic |
| Library selection |
cDNA |
| Instrument model |
Illumina NovaSeq 6000 |
| |
|
| Data processing |
Cellrager 5.0.1 count against Sscrofa11.1+KP055815
Genome_build: Sscrofa 11.1 + KP055815
Supplementary_files_format_and_content: Hdf5 (Feature-Barcode Matrix)
|
| |
|
| Submission date |
Feb 10, 2022 |
| Last update date |
Oct 25, 2022 |
| Contact name |
Jordi Argilaguet |
| E-mail(s) |
jordi.argilaguet@gmail.com
|
| Organization name |
IRTA
|
| Department |
CReSA
|
| Street address |
Campus de la Universitat Autònoma de Barcelona, Edifici CReSA s/n
|
| City |
Cerdanyola del Vallès (Bellaterra) |
| State/province |
Spain |
| ZIP/Postal code |
08193 |
| Country |
Spain |
| |
|
| Platform ID |
GPL26351 |
| Series (1) |
| GSE196472 |
Single-cell RNA-sequencing of porcine submandibular lymph node cells from ASF-immune and nonimmune pigs |
|
| Relations |
| BioSample |
SAMN25829265 |
| SRA |
SRX14127111 |
