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Sample GSM549373 Query DataSets for GSM549373
Status Public on Aug 11, 2010
Title WB-ASLE-6645
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 49
gender: Female
ethnicity: Caucasian
illness: ASLE
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 02, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) DChaussabel@benaroyaresearch.org
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 2.290221 0.3056653
ILMN_2055271 5.568758 0.1831357
ILMN_1736007 1.464647 0.3478261
ILMN_2383229 12.99337 0.05533597
ILMN_1806310 1.183811 0.3583663
ILMN_1779670 -7.459361 0.8695652
ILMN_2321282 4.463236 0.2239789
ILMN_1671474 7.337496 0.1277997
ILMN_1772582 2.227376 0.3096179
ILMN_1735698 4.28067 0.2279315
ILMN_1653355 17.80729 0.02503294
ILMN_1717783 5.877969 0.1673254
ILMN_1705025 4.571327 0.2173913
ILMN_1814316 -2.606657 0.599473
ILMN_2359168 -5.78768 0.7826087
ILMN_1731507 -2.915024 0.6166008
ILMN_1787689 -5.9098 0.7878788
ILMN_1745607 1.476887 0.3478261
ILMN_2136495 -7.820557 0.8814229
ILMN_1668111 -3.952718 0.6864295

Total number of rows: 48803

Table truncated, full table size 1483 Kbytes.




Supplementary file Size Download File type/resource
GSM549373_4487653182_C_Raw.txt.gz 527.2 Kb (ftp)(http) TXT
Processed data included within Sample table

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