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GEO accession:
Sample GSM46911
Query DataSets for GSM46911
Status
Public on Mar 31, 2005
Title
Ovary - 29229
Sample type
RNA
Source name
Ovary
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Quality metric = 28S to 18S: 1.6
Patient Age: 40-50
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : Yes
Years of Tobacco Use: 16-20
Type of Tobacco Use: Cigarettes
Alcohol Consumption?: No
Family History of Cancer?: Yes
Clinical Question: Stage
Clinical Value: No AJCC Staging Scheme
Clinical Question: Grade
Clinical Value: 1
Primary Site: Ovary
Clinical Question: Histology
Clinical Value: Papillary serous tumor of low malignant potential
Submission date
Mar 31, 2005
Last update date
Aug 28, 2018
Contact name
Erin Curley
E-mail(s)
ecurley@intgen.org
Phone
602-343-8808
Fax
602-343-8440
URL
http://www.intgen.org
Organization name
IGC
Department
Lab
expO
Street address
445 N. 5th Street
City
Phoenix
State/province
AZ
ZIP/Postal code
85004
Country
USA
Platform ID
GPL570
Series (1)
GSE2109
Expression Project for Oncology (expO)
Relations
Reanalyzed by
GSE64985
Reanalyzed by
GSE119087
Data table header descriptions
ID_REF
The name of the probe set, blank for control probes
VALUE
The signal value calculated by MAS5, normalized
ABS_CALL
The detection value calculated by the MAS5
DETECTION P-VALUE
The detection p-value calculated by the MAS5
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
663
P
0.000662
AFFX-BioB-M_at
949.4
P
7e-005
AFFX-BioB-3_at
477
P
7e-005
AFFX-BioC-5_at
1712.1
P
4.4e-005
AFFX-BioC-3_at
2518
P
4.4e-005
AFFX-BioDn-5_at
4837.9
P
4.4e-005
AFFX-BioDn-3_at
8577.3
P
4.4e-005
AFFX-CreX-5_at
19490.7
P
5.2e-005
AFFX-CreX-3_at
23333
P
4.4e-005
AFFX-DapX-5_at
3.5
A
0.749204
AFFX-DapX-M_at
4.7
A
0.868639
AFFX-DapX-3_at
22.7
A
0.559354
AFFX-LysX-5_at
29.4
A
0.156732
AFFX-LysX-M_at
4.3
A
0.932322
AFFX-LysX-3_at
38.4
A
0.108979
AFFX-PheX-5_at
2.5
A
0.953518
AFFX-PheX-M_at
4.4
A
0.910522
AFFX-PheX-3_at
17.7
A
0.455413
AFFX-ThrX-5_at
6.4
A
0.712257
AFFX-ThrX-M_at
4
A
0.963443
Total number of rows:
54675
Table truncated, full table size
1442 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM46911.CEL.gz
8.3 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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