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Sample GSM45598 Query DataSets for GSM45598
Status Public on May 30, 2005
Title ChromatinA1-IP1
Sample type genomic
 
Channel 1
Source name anti-HSF enriched chromatin
Organism Drosophila melanogaster
Extracted molecule genomic DNA
 
Channel 2
Source name pre-immune sera chromatin
Organism Drosophila melanogaster
Extracted molecule genomic DNA
 
 
Description Genomic tiling array interogated with heat shock factor immunopurified chromatin.
 
Submission date Mar 21, 2005
Last update date May 29, 2005
Contact name Steve Russell
E-mail(s) s.russell@gen.cam.ac.uk
Phone +44 (0) 1223 766929
Fax +44 (0) 1223 333992
Organization name University of Cambridge
Department Department of Genetics
Street address Downing Street
City Cambridge
ZIP/Postal code CB2 3EH
Country United Kingdom
 
Platform ID GPL1918
Series (1)
GSE2423 Tiling Array HSF immunopurification

Data table header descriptions
ID_REF
VALUE VSN normalised ratio anti-HSF to pre-immune
fgMedian1 foreground (spot) median pixel intensity of channel 1
bgMedian1 background (local area around spot) median pixel intensity of channel 1
fgAdjMAD1 foreground (spot) pixel intensity variability of channel 1
bgAdjMAD1 background (local area around spot) pixel intensity variability of channel 1
fgMedian2 foreground (spot) median pixel intensity of channel 2
bgMedian2 background (local area around spot) median pixel intensity of channel 2
fgAdjMAD2 foreground (spot) pixel intensity variability of channel 2
bgAdjMAD2 background (local area around spot) pixel intensity variability of channel 2
fgN number of pixels in the foreground
bgN number of pixels in the background

Data table
ID_REF VALUE fgMedian1 bgMedian1 fgAdjMAD1 bgAdjMAD1 fgMedian2 bgMedian2 fgAdjMAD2 bgAdjMAD2 fgN bgN
1001003457 -0.5850392 11689 906 4821.42 72.6474 10607 464 3860.69 34.0998 349 3095
1001003481 -0.319328 16067 725 3200.93 40.0302 12335 450 2016.34 26.6868 349 3095
1001003505 -0.6606729 11312 648 6513.06 40.0302 10771 474 6163.17 32.6172 421 2983
1001003529 -0.4388201 6535 621 3150.53 37.065 5308 435 2455.19 26.6868 349 3095
1001003553 -0.5573833 14115 740 9101.68 44.478 12639 462 7979.35 31.1346 489 2871
1001003577 -0.3726207 13920 664 3884.41 37.065 11044 461 2699.81 25.2042 421 2983
1001003601 -0.3427298 25234 657 7303.29 48.9258 19761 463 4954.85 37.065 421 2983
1001003625 -0.2361491 14778 690 5028.98 51.891 10737 446 3153.49 31.1346 293 3179
1001003458 -0.4820537 10492 1221 5294.36 40.0302 8883 486 4582.72 22.239 421 2983
1001003482 -0.5395665 3979 699 2558.97 40.0302 3348 406 2317.3 22.239 489 2871
1001003506 -0.2993328 16159 649 5120.9 32.6172 12245 420 2736.88 25.2042 489 2871
1001003530 -0.2507504 18421 629 8194.33 40.0302 13537 432 3875.52 31.1346 349 3095
1001003554 -0.3111045 11251 678 5134.24 31.1346 8551 402 3611.61 23.7216 421 2983
1001003578 -0.1763752 17052 777 1802.84 44.478 11928 425 1064.51 29.652 349 3095
1001003602 -0.572425 13253 606 10619.9 34.0998 11967 423 8938.6 25.2042 577 2759
1001003626 -0.3876326 7653 658 2123.08 38.5476 6054 436 1780.6 29.652 293 3179
1001003459 -0.3095263 11698 1425 4558.99 71.1648 8887 523 3579 31.1346 421 2983
1001003483 -0.4624615 10361 731 3472.25 72.6474 8660 434 2621.24 74.13 349 3095
1001003507 -0.2910447 11302 669 4266.92 32.6172 8481 400 3008.2 22.239 349 3095
1001003531 -0.3304692 2880 614 1774.67 34.0998 2132 416 1346.2 22.239 421 2983

Total number of rows: 3333

Table truncated, full table size 258 Kbytes.




Supplementary data files not provided
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