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Sample GSM45120 Query DataSets for GSM45120
Status Public on May 30, 2005
Title hSF-ChIP Chromatin-B-IP2
Sample type genomic
 
Channel 1
Source name anti-HSF enriched chromatin
Organism Drosophila melanogaster
Extracted molecule genomic DNA
 
Channel 2
Source name pre-immune sera chromatin
Organism Drosophila melanogaster
Extracted molecule genomic DNA
 
 
Description Chromatin Immunopurification with anti-Heat Shock Facotor from heat shocked Drosophila embryos
 
Submission date Mar 10, 2005
Last update date May 29, 2005
Contact name Steve Russell
E-mail(s) s.russell@gen.cam.ac.uk
Phone +44 (0) 1223 766929
Fax +44 (0) 1223 333992
Organization name University of Cambridge
Department Department of Genetics
Street address Downing Street
City Cambridge
ZIP/Postal code CB2 3EH
Country United Kingdom
 
Platform ID GPL1898
Series (1)
GSE2398 Drosophila HSF chromatin IP -cDNA array

Data table header descriptions
ID_REF
VALUE VSN normalised ratio anti-HSF to pre-immune
fgMedian1 foreground (spot) median pixel intensity of channel 1
bgMedian1 background (local area around spot) median pixel intensity of channel 1
fgAdjMAD1 foreground (spot) pixel intensity variability of channel 1
bgAdjMAD1 background (local area around spot) pixel intensity variability of channel 1
fgMedian2 foreground (spot) median pixel intensity of channel 2
bgMedian2 background (local area around spot) median pixel intensity of channel 2
fgAdjMAD2 foreground (spot) pixel intensity variability of channel 2
bgAdjMAD2 background (local area around spot) pixel intensity variability of channel 2
fgN number of pixels in the foreground
bgN number of pixels in the background

Data table
ID_REF VALUE fgMedian1 bgMedian1 fgAdjMAD1 bgAdjMAD1 fgMedian2 bgMedian2 fgAdjMAD2 bgAdjMAD2 fgN bgN
1000004685 -1.43337 427 348 77.0952 60.7866 59 43 14.826 10.3782 421 3108
1000001857 0.470241 908 397 164.569 65.2344 539 44 124.538 10.3782 489 2996
1000001365 1.41159 508 349 84.5082 60.7866 360 42 83.0256 10.3782 421 3108
1000004504 0.640688 674 358 114.16 65.2344 383 44 91.9212 10.3782 489 2996
1000000780 0.275818 554 322 106.747 60.7866 221 43 54.8562 10.3782 577 2884
1000001590 -1.69572 923 348 240.181 63.7518 157 42 53.3736 10.3782 577 2884
1000001591 0.16339 517 346 103.782 62.2692 183 42 62.2692 8.8956 489 2996
1000000299 -0.21843 685 347 118.608 62.2692 237 42 54.8562 10.3782 489 2996
1000001858 -0.263434 1013 380 210.529 63.7518 395 43 96.369 10.3782 421 3108
1000001859 -1.24974 510 352 97.8516 62.2692 90 41 23.7216 10.3782 421 3108
1000003881 -0.45573 663 358 112.678 62.2692 198 43 50.4084 8.8956 489 2996
1000001592 -0.492199 770 339 124.538 60.7866 240 42 54.8562 10.3782 421 3108
1000001593 -0.785026 567 343 94.8864 63.7518 132 42 34.0998 10.3782 489 2996
1000001860 -0.0441419 1078 358 253.525 65.2344 490 43 137.882 10.3782 489 2996
1000001861 -0.138459 663 352 128.986 60.7866 236 49 60.7866 11.8608 489 2996
1000004686 -0.268089 596 351 133.434 63.7518 186 42 48.9258 8.8956 577 2884
1000004505 0.999614 532 369 88.956 63.7518 310 44 77.0952 10.3782 489 2996
1000001862 0.0350668 2180 358 351.376 63.7518 1191 47 207.564 10.3782 489 2996
1000001594 -0.32067 522 349 90.4386 62.2692 145 42 32.6172 8.8956 421 3108
1000006688 -1.0627 426 368 77.0952 62.2692 70 44 16.3086 10.3782 421 3108

Total number of rows: 5364

Table truncated, full table size 395 Kbytes.




Supplementary data files not provided
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