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Sample GSM45118 Query DataSets for GSM45118
Status Public on May 30, 2005
Title hSF-ChIP Chromatin-A-IP4-1
Sample type genomic
 
Channel 1
Source name anti-HSF enriched chromatin
Organism Drosophila melanogaster
Extracted molecule genomic DNA
 
Channel 2
Source name pre-immune sera chromatin
Organism Drosophila melanogaster
Extracted molecule genomic DNA
 
 
Description Chromatin Immunopurification with anti-Heat Shock Facotor from heat shocked Drosophila embryos
 
Submission date Mar 10, 2005
Last update date May 29, 2005
Contact name Steve Russell
E-mail(s) s.russell@gen.cam.ac.uk
Phone +44 (0) 1223 766929
Fax +44 (0) 1223 333992
Organization name University of Cambridge
Department Department of Genetics
Street address Downing Street
City Cambridge
ZIP/Postal code CB2 3EH
Country United Kingdom
 
Platform ID GPL1898
Series (1)
GSE2398 Drosophila HSF chromatin IP -cDNA array

Data table header descriptions
ID_REF
VALUE VSN normalised ratio anti-HSF to pre-immune
fgMedian1 foreground (spot) median pixel intensity of channel 1
bgMedian1 background (local area around spot) median pixel intensity of channel 1
fgAdjMAD1 foreground (spot) pixel intensity variability of channel 1
bgAdjMAD1 background (local area around spot) pixel intensity variability of channel 1
fgMedian2 foreground (spot) median pixel intensity of channel 2
bgMedian2 background (local area around spot) median pixel intensity of channel 2
fgAdjMAD2 foreground (spot) pixel intensity variability of channel 2
bgAdjMAD2 background (local area around spot) pixel intensity variability of channel 2
fgN number of pixels in the foreground
bgN number of pixels in the background

Data table
ID_REF VALUE fgMedian1 bgMedian1 fgAdjMAD1 bgAdjMAD1 fgMedian2 bgMedian2 fgAdjMAD2 bgAdjMAD2 fgN bgN
1000004685 0.701439 1189 1103 240.181 219.425 160 74 60.7866 32.6172 421 3108
1000001857 0.122099 2193 1175 465.536 228.32 500 75 158.638 34.0998 489 2996
1000001365 -1.43022 1635 1159 317.276 228.32 117 69 54.8562 29.652 421 3108
1000004504 1.17785 1670 1132 336.55 231.286 585 74 225.355 32.6172 489 2996
1000000780 -0.21517 1404 981 266.868 203.116 163 68 56.3388 29.652 489 2996
1000001590 0.437333 1473 1142 306.898 220.907 271 70 118.608 31.1346 577 2884
1000001591 -2.33367 2193 1034 572.284 219.425 116 69 51.891 29.652 489 2996
1000000299 -0.481869 2185 1099 389.924 225.355 339 72 111.195 29.652 489 2996
1000001858 -1.07721 2650 1134 547.079 229.803 314 76 108.23 34.0998 489 2996
1000001859 -1.03877 1423 1200 243.146 238.699 107 76 40.0302 32.6172 349 3220
1000003881 0.18466 1451 1156 296.52 223.873 224 70 91.9212 29.652 577 2884
1000001592 -0.635601 1720 1018 348.411 213.494 202 68 72.6474 28.1694 421 3108
1000001593 -0.120821 1718 1031 336.55 214.977 274 69 109.712 29.652 489 2996
1000001860 0.892876 1666 1059 293.555 219.425 484 69 149.743 29.652 421 3108
1000001861 0.542141 2254 1227 461.089 250.559 688 116 216.46 47.4432 489 2996
1000004686 0.0381365 1375 1096 274.281 216.46 178 72 78.5778 31.1346 577 2884
1000004505 -0.880124 2510 1283 481.845 244.629 328 70 106.747 29.652 489 2996
1000001862 0.210755 3436 1227 594.523 246.112 1036 103 212.012 44.478 489 2996
1000001594 -0.325693 1386 1022 290.59 212.012 148 66 54.8562 28.1694 421 3108
1000006688 -0.557393 1333 1225 249.077 232.768 117 71 50.4084 31.1346 489 2996

Total number of rows: 5364

Table truncated, full table size 404 Kbytes.




Supplementary data files not provided
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