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Sample GSM45095 Query DataSets for GSM45095
Status Public on May 30, 2005
Title hSF-ChIP Chromatin-A-IP2-3
Sample type genomic
 
Channel 1
Source name anti-HSF enriched chromatin
Organism Drosophila melanogaster
Extracted molecule genomic DNA
 
Channel 2
Source name pre-immune sera chromatin
Organism Drosophila melanogaster
Extracted molecule genomic DNA
 
 
Description Chromatin Immunopurification with anti-Heat Shock Facotor from heat shocked Drosophila embryos
 
Submission date Mar 10, 2005
Last update date May 29, 2005
Contact name Steve Russell
E-mail(s) s.russell@gen.cam.ac.uk
Phone +44 (0) 1223 766929
Fax +44 (0) 1223 333992
Organization name University of Cambridge
Department Department of Genetics
Street address Downing Street
City Cambridge
ZIP/Postal code CB2 3EH
Country United Kingdom
 
Platform ID GPL1898
Series (1)
GSE2398 Drosophila HSF chromatin IP -cDNA array

Data table header descriptions
ID_REF
VALUE VSN normalised ratio anti-HSF to pre-immune
fgMedian1 foreground (spot) median pixel intensity of channel 1
bgMedian1 background (local area around spot) median pixel intensity of channel 1
fgAdjMAD1 foreground (spot) pixel intensity variability of channel 1
bgAdjMAD1 background (local area around spot) pixel intensity variability of channel 1
fgMedian2 foreground (spot) median pixel intensity of channel 2
bgMedian2 background (local area around spot) median pixel intensity of channel 2
fgAdjMAD2 foreground (spot) pixel intensity variability of channel 2
bgAdjMAD2 background (local area around spot) pixel intensity variability of channel 2
fgN number of pixels in the foreground
bgN number of pixels in the background

Data table
ID_REF VALUE fgMedian1 bgMedian1 fgAdjMAD1 bgAdjMAD1 fgMedian2 bgMedian2 fgAdjMAD2 bgAdjMAD2 fgN bgN
1000004685 -0.91257 1134 709 173.464 26.6868 609 481 59.304 19.2738 421 1443
1000001857 -0.64347 4259 806 1581.93 51.891 1899 533 594.523 32.6172 421 1443
1000001365 0.365587 2553 940 647.896 85.9908 1857 583 526.323 90.4386 349 1555
1000004504 -0.0892575 4125 855 1495.94 47.4432 2391 540 910.316 42.9954 421 1443
1000000780 0.428438 2609 1171 464.054 102.299 1952 911 415.128 91.9212 421 1443
1000001590 -0.830268 4284 762 1172.74 50.4084 1760 502 327.655 34.0998 421 1443
1000001591 -1.04387 2308 741 410.68 32.6172 1039 475 130.469 22.239 293 1639
1000000299 -0.542179 4380 943 1513.73 78.5778 2035 603 523.358 66.717 421 1443
1000001858 -0.0910783 5596 954 1604.17 106.747 3184 638 839.152 87.4734 349 1555
1000001859 0.709472 1263 983 158.638 77.0952 1019 603 180.877 62.2692 349 1555
1000003881 0.574537 2111 1224 641.966 68.1996 1666 708 544.114 38.5476 349 1555
1000001592 -0.245794 2693 781 754.643 44.478 1519 504 361.754 28.1694 349 1555
1000001593 -0.547951 5616 840 1863.63 56.3388 2518 538 598.97 38.5476 349 1555
1000001860 0.233803 6693 1069 2499.66 83.0256 4552 732 1454.43 77.0952 349 1555
1000001861 -0.168956 3971 851 993.342 72.6474 2221 546 502.601 41.5128 421 1443
1000004686 -0.442424 2567 729 690.892 28.1694 1357 484 298.003 20.7564 349 1555
1000004505 -0.247922 2878 832 1091.19 48.9258 1608 512 517.427 35.5824 421 1443
1000001862 -0.440083 8799 829 2630.13 53.3736 4011 547 1065.99 47.4432 421 1443
1000001594 0.0932476 3316 844 880.664 45.9606 2123 554 501.119 29.652 349 1555
1000006688 -0.295379 1242 925 146.777 69.6822 783 626 66.717 62.2692 421 1443

Total number of rows: 5364

Table truncated, full table size 412 Kbytes.




Supplementary data files not provided
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