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Sample GSM44997 Query DataSets for GSM44997
Status Public on May 30, 2005
Title HSF-ChIP Chromatin-A-IP1-2
Sample type genomic
 
Channel 1
Source name pre-immune sera chromatin
Organism Drosophila melanogaster
Extracted molecule genomic DNA
 
Channel 2
Source name anti-HSF enriched chromatin
Organism Drosophila melanogaster
Extracted molecule genomic DNA
 
 
Description Chromatin Immunopurification with anti-Heat Shock Facotor from heat shocked Drosophila embryos
 
Submission date Mar 09, 2005
Last update date May 29, 2005
Contact name Steve Russell
E-mail(s) s.russell@gen.cam.ac.uk
Phone +44 (0) 1223 766929
Fax +44 (0) 1223 333992
Organization name University of Cambridge
Department Department of Genetics
Street address Downing Street
City Cambridge
ZIP/Postal code CB2 3EH
Country United Kingdom
 
Platform ID GPL1898
Series (1)
GSE2398 Drosophila HSF chromatin IP -cDNA array

Data table header descriptions
ID_REF
VALUE VSN normalised ratio anti-HSF to pre-immune
fgMedian1 foreground (spot) median pixel intensity of channel 1
bgMedian1 background (local area around spot) median pixel intensity of channel 1
fgAdjMAD1 foreground (spot) pixel intensity variability of channel 1
bgAdjMAD1 background (local area around spot) pixel intensity variability of channel 1
fgMedian2 foreground (spot) median pixel intensity of channel 2
bgMedian2 background (local area around spot) median pixel intensity of channel 2
fgAdjMAD2 foreground (spot) pixel intensity variability of channel 2
bgAdjMAD2 background (local area around spot) pixel intensity variability of channel 2
fgN number of pixels in the foreground
bgN number of pixels in the background

Data table
ID_REF VALUE fgMedian1 bgMedian1 fgAdjMAD1 bgAdjMAD1 fgMedian2 bgMedian2 fgAdjMAD2 bgAdjMAD2 fgN bgN
1000004685 -0.338508 1059 430 191.255 72.6474 222 50 44.478 11.8608 349 3220
1000001857 -0.383276 10549 538 3544.9 90.4386 2760 72 787.261 20.7564 489 2996
1000001365 -0.263711 4149 496 695.339 80.0604 959 68 136.399 17.7912 421 3108
1000004504 -0.058205 6492 431 2163.11 68.1996 1349 49 444.78 11.8608 489 2996
1000000780 -0.587006 5800 493 2127.53 84.5082 1687 72 514.462 20.7564 577 2884
1000001590 0.195205 5559 422 1914.04 71.1648 978 52 329.137 13.3434 577 2884
1000001591 -0.203103 2645 431 821.36 72.6474 567 53 164.569 13.3434 489 2996
1000000299 0.365461 12966 582 3460.39 100.817 2074 103 604.901 32.6172 577 2884
1000001858 -0.228597 22202 583 4145.35 97.8516 5320 87 942.934 26.6868 421 3108
1000001859 -1.01048 1767 550 357.307 88.956 586 86 118.608 25.2042 489 2996
1000003881 0.338358 5418 453 1003.72 75.6126 871 53 143.812 13.3434 489 2996
1000001592 -1.3639 4019 451 1200.91 75.6126 1876 55 388.441 14.826 421 3108
1000001593 0.369349 7115 465 2404.78 75.6126 1128 58 437.367 14.826 577 2884
1000001860 -0.0644954 21322 596 6304.02 94.8864 4569 79 1255.76 20.7564 489 2996
1000001861 0.0291392 4487 406 1378.82 69.6822 868 48 265.385 11.8608 489 2996
1000004686 -0.207691 3784 426 681.996 69.6822 839 52 145.295 13.3434 577 2884
1000004505 -0.293975 4195 450 593.04 72.6474 989 53 157.156 13.3434 489 2996
1000001862 -0.203996 15275 425 2855.49 74.13 3578 52 615.279 14.826 489 2996
1000001594 -0.194975 5883 486 1596.76 81.543 1329 68 378.063 17.7912 421 3108
1000006688 -0.722333 1273 443 249.077 74.13 344 51 78.5778 13.3434 421 3108

Total number of rows: 5364

Table truncated, full table size 402 Kbytes.




Supplementary data files not provided
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