|
| Status |
Public on May 26, 2020 |
| Title |
RBD00006-T |
| Sample type |
SRA |
| |
|
| Source name |
peripheral blood neutrophil
|
| Organism |
Homo sapiens |
| Characteristics |
cell type: peripheral blood neutrophil
condition: steady state
sorting: Sorted by CD33+
|
| Extracted molecule |
total RNA |
| Extraction protocol |
BD Rhapsody Cartridge Reagent Kit
|
| |
|
| Library strategy |
RNA-Seq |
| Library source |
transcriptomic |
| Library selection |
cDNA |
| Instrument model |
Illumina NovaSeq 6000 |
| |
|
| Data processing |
sequenced reads of human were aligned to the hg38 human transcriptome, then quantify the expression of transcripts in each cell using BD™ Rhapsody Whole Transcriptome Assay Analysis Pipeline
Genome_build: hg38 (human)
Supplementary_files_format_and_content: tab-delimited text files include UMIs for each Sample
|
| |
|
| Submission date |
Apr 13, 2020 |
| Last update date |
May 27, 2020 |
| Contact name |
Xuemei Xie |
| E-mail(s) |
xiexuemei.fiona@gmail.com
|
| Organization name |
Boston Children's Hospital
|
| Department |
Transfusion Medicine
|
| Lab |
Luo's Lab
|
| Street address |
811 Enders Building, 320 Longwood Ave.
|
| City |
Boston |
| State/province |
MA |
| ZIP/Postal code |
02115 |
| Country |
USA |
| |
|
| Platform ID |
GPL24676 |
| Series (2) |
| GSE137539 |
Single-cell transcriptome profiling reveals neutrophil heterogeneity in homeostasis and infection |
| GSE137540 |
Single-cell transcriptome profiling reveals neutrophil heterogeneity in homeostasis and infection |
|
| Relations |
| BioSample |
SAMN14591038 |
| SRA |
SRX8108915 |
