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Sample GSM39123 Query DataSets for GSM39123
Status Public on Jan 22, 2005
Title DNGM-4
Sample type RNA
 
Source name Human PBMC
Organism Homo sapiens
Extracted molecule total RNA
 
Description HIV seropositive drug naïve group, viral load medium
Keywords = HIV, Human, PBMC, in vivo
 
Submission date Jan 19, 2005
Last update date Oct 28, 2005
Contact name Maryanne Vahey
E-mail(s) mvahey@hivresearch.org
Phone 301-251-5058
Fax 301-762-7460
Organization name Walter Reed Army Institute of Research
Department
Lab Laboratory of Functional Genomics
Street address 1600 East Gude Drive
City Rockville
State/province MD
ZIP/Postal code 20850
Country USA
 
Platform ID GPL201
Series (1)
GSE2171 HIV-1 infection in human PBMCs in vivo

Data table header descriptions
ID_REF Affymetrix ID
VALUE signal intensity output from MAS5.0 with target signal intensity being set to 500
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M)
DETECTION P-VALUE p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 972.5 A 0.095667
AFFX-BioB-M_at 1191.5 P 0.026111
AFFX-BioB-3_at 705.7 M 0.054213
AFFX-BioC-5_at 3772.6 P 0.001102
AFFX-BioC-3_at 1379.6 P 0.004484
AFFX-BioDn-5_at 973.3 A 0.147939
AFFX-BioDn-3_at 4668.1 P 0.001593
AFFX-CreX-5_at 80.6 A 0.990663
AFFX-CreX-3_at 522.5 A 0.485110
AFFX-HUMISGF3A/M97935_5_at 117.7 A 0.686277
AFFX-HUMISGF3A/M97935_MA_at 191.2 A 0.834139
AFFX-HUMISGF3A/M97935_MB_at 470.9 M 0.062929
AFFX-HUMISGF3A/M97935_3_at 912.6 P 0.000857
AFFX-HUMRGE/M10098_5_at 113.9 A 0.910522
AFFX-HUMRGE/M10098_M_at 140.1 A 0.904333
AFFX-HUMRGE/M10098_3_at 233.0 A 0.686277
AFFX-HUMGAPDH/M33197_5_at 6250.3 P 0.000070
AFFX-HUMGAPDH/M33197_M_at 6679.5 P 0.002275
AFFX-HUMGAPDH/M33197_3_at 7065.9 P 0.000044
AFFX-HSAC07/X00351_5_at 9576.8 P 0.000195

Total number of rows: 8793

Table truncated, full table size 239 Kbytes.




Supplementary file Size Download File type/resource
GSM39123.cel.gz 1.5 Mb (ftp)(http) CEL

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