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GEO accession:
Sample GSM38674
Query DataSets for GSM38674
Status
Public on Dec 20, 2005
Title
11m1
Sample type
RNA
Source name
Trizol extracted total RNA from uterine fibroid tissue.
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Uterine fibroid tissue carrying wild-type fumarate hydratase gene.
Submission date
Jan 10, 2005
Last update date
Dec 20, 2005
Contact name
Sakari Vanharanta
E-mail(s)
sakari.vanharanta@helsinki.fi
Organization name
University of Helsinki
Department
Translational Cancer Medicine Program
Lab
Vanharanta
Street address
Haartmaninkatu 8
City
Helsinki
ZIP/Postal code
00014
Country
Finland
Platform ID
GPL96
Series (1)
GSE2152
The effect of FH mutations on fibroid expression profile
Data table header descriptions
ID_REF
VALUE
MAS 5.0 Algorithm (mean scaled to 100)
ABS_CALL
MAS 5.0 Absent, Marginal, Present call (Alpha1 = 0.05, Alpha2 = 0.065)
DETECTION P-VALUE
MAS 5.0 Detection p-value
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
75.5
P
0.011384
AFFX-BioB-M_at
141.8
P
0.000581
AFFX-BioB-3_at
50.7
P
0.009337
AFFX-BioC-5_at
219
P
0.000225
AFFX-BioC-3_at
148.7
P
0.000225
AFFX-BioDn-5_at
149.9
P
0.00006
AFFX-BioDn-3_at
1052
P
0.00011
AFFX-CreX-5_at
1996.7
P
0.000044
AFFX-CreX-3_at
2987.5
P
0.000044
AFFX-DapX-5_at
8
A
0.175328
AFFX-DapX-M_at
12.1
A
0.239063
AFFX-DapX-3_at
2.7
A
0.824672
AFFX-LysX-5_at
0.7
A
0.772364
AFFX-LysX-M_at
4.7
A
0.574038
AFFX-LysX-3_at
4.8
A
0.275146
AFFX-PheX-5_at
6.2
A
0.440646
AFFX-PheX-M_at
1.1
A
0.783476
AFFX-PheX-3_at
6.4
A
0.544587
AFFX-ThrX-5_at
3.5
A
0.760937
AFFX-ThrX-M_at
2.4
A
0.724854
Total number of rows:
22283
Table truncated, full table size
579 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM38674.CEL.gz
3.3 Mb
(ftp)
(http)
CEL
GSM38674.EXP.gz
483 b
(ftp)
(http)
EXP
GSM38674.RPT.gz
941 b
(ftp)
(http)
RPT
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