NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM349854 Query DataSets for GSM349854
Status Public on Dec 09, 2009
Title SNT-15 duplicate 1
Sample type RNA
 
Source name Sample
Organism Homo sapiens
Characteristics Gamma-delta T cell line derived from patient with chronic active EBV infection
Growth protocol IL-2 700U/ml
Extracted molecule total RNA
Extraction protocol RNeasy kit
Label Biotin
Label protocol One-cycle Target Labeling GeneChip Expression Analysis Technical Mannual, 701021 Rev.5 Section 2 Eukaryotic Sample and Array processing Chapter 1 Eukaryotic Target Prepartion
 
Hybridization protocol GeneChip Expression Analysis Technical Mannual, 701021 Rev.5 Hybridization Oven 640 110V (Affymetrix 800138) Wash and staining: Fluidics Station 450 (Affymetrix 00-0079)
Scan protocol GeneChip Scanner 3000 (Affymetrix 00-0074) GeneChip Operating Software ver.1.4 (Affymetrix 690036)
Description chronic active Epstein-Barr virus (EBV) infection
Data processing GeneChip Operating Software ver.1.4 (Affymetrix 690036)
 
Submission date Dec 09, 2008
Last update date Aug 28, 2018
Contact name Junko H Ohyashiki
E-mail(s) junko@hh.iij4u.or.jp
Phone +81-3-3342-6111(ext.5999)
Fax +81-3-5381-6651
Organization name Tokyo Medical University
Department Intractable Immune System Diseases Research Center
Street address 6-7-1, Nishishinjuku, Shinjuku-ku
City Tokyo
ZIP/Postal code 160-0023
Country Japan
 
Platform ID GPL570
Series (1)
GSE13906 NK-cell associated receptors expression in EBV-positive gamma-delta T cell lines.
Relations
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE signal
ABS_CALL
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 993.9 P 0.000258
AFFX-BioB-M_at 1374.7 P 0.000044
AFFX-BioB-3_at 933.9 P 0.000052
AFFX-BioC-5_at 2782.7 P 0.000052
AFFX-BioC-3_at 3255.3 P 0.000044
AFFX-BioDn-5_at 6064.3 P 0.000044
AFFX-BioDn-3_at 12871.3 P 0.000052
AFFX-CreX-5_at 34204.7 P 0.000052
AFFX-CreX-3_at 41768.1 P 0.000044
AFFX-DapX-5_at 2357.4 P 0.000044
AFFX-DapX-M_at 3950.3 P 0.000225
AFFX-DapX-3_at 5699.3 P 0.000044
AFFX-LysX-5_at 316.4 P 0.000127
AFFX-LysX-M_at 468 P 0.000297
AFFX-LysX-3_at 903.5 P 0.000052
AFFX-PheX-5_at 526.8 P 0.000044
AFFX-PheX-M_at 668.4 P 0.000044
AFFX-PheX-3_at 558.4 P 0.000044
AFFX-ThrX-5_at 691.4 P 0.000095
AFFX-ThrX-M_at 1038.7 P 0.000044

Total number of rows: 54675

Table truncated, full table size 1432 Kbytes.




Supplementary file Size Download File type/resource
GSM349854.CEL.gz 7.9 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap