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Sample GSM349850 Query DataSets for GSM349850
Status Public on Dec 09, 2009
Title SNT-8 duplicate 1
Sample type RNA
 
Source name Sample
Organism Homo sapiens
Characteristics Gamma-delta T cell line derived from patient with nasal T cell lymphoma
Growth protocol IL-2 700U/ml
Extracted molecule total RNA
Extraction protocol RNeasy kit
Label Biotin
Label protocol One-cycle Target Labeling GeneChip Expression Analysis Technical Mannual, 701021 Rev.5 Section 2 Eukaryotic Sample and Array processing Chapter 1 Eukaryotic Target Prepartion
 
Hybridization protocol GeneChip Expression Analysis Technical Mannual, 701021 Rev.5 Hybridization Oven 640 110V (Affymetrix 800138) Wash and staining: Fluidics Station 450 (Affymetrix 00-0079)
Scan protocol GeneChip Scanner 3000 (Affymetrix 00-0074) GeneChip Operating Software ver.1.4 (Affymetrix 690036)
Description nasal T cell lymphoma
Data processing GeneChip Operating Software ver.1.4 (Affymetrix 690036)
 
Submission date Dec 09, 2008
Last update date Aug 28, 2018
Contact name Junko H Ohyashiki
E-mail(s) junko@hh.iij4u.or.jp
Phone +81-3-3342-6111(ext.5999)
Fax +81-3-5381-6651
Organization name Tokyo Medical University
Department Intractable Immune System Diseases Research Center
Street address 6-7-1, Nishishinjuku, Shinjuku-ku
City Tokyo
ZIP/Postal code 160-0023
Country Japan
 
Platform ID GPL570
Series (1)
GSE13906 NK-cell associated receptors expression in EBV-positive gamma-delta T cell lines.
Relations
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE signal
ABS_CALL
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 968.1 P 0.00034
AFFX-BioB-M_at 1437 P 0.000044
AFFX-BioB-3_at 986.8 P 0.00006
AFFX-BioC-5_at 3257.4 P 0.000052
AFFX-BioC-3_at 4264.8 P 0.000044
AFFX-BioDn-5_at 6545.3 P 0.000044
AFFX-BioDn-3_at 14055 P 0.000044
AFFX-CreX-5_at 34732 P 0.000052
AFFX-CreX-3_at 40419.3 P 0.000044
AFFX-DapX-5_at 1708.5 P 0.000044
AFFX-DapX-M_at 2951.4 P 0.000446
AFFX-DapX-3_at 2474.6 P 0.000052
AFFX-LysX-5_at 233.9 P 0.000169
AFFX-LysX-M_at 278.9 P 0.002556
AFFX-LysX-3_at 555.6 P 0.00007
AFFX-PheX-5_at 259.6 P 0.00006
AFFX-PheX-M_at 438.6 P 0.000147
AFFX-PheX-3_at 368.8 P 0.000297
AFFX-ThrX-5_at 372.9 P 0.000081
AFFX-ThrX-M_at 618.4 P 0.000044

Total number of rows: 54675

Table truncated, full table size 1434 Kbytes.




Supplementary file Size Download File type/resource
GSM349850.CEL.gz 7.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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