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Sample GSM2828837 Query DataSets for GSM2828837
Status Public on Oct 24, 2017
Title ChIP-seq from gastroesophageal sphincter (ENCLB589WEA)
Sample type SRA
 
Source name Homo sapiens gastroesophageal sphincter tissue male adult (37 years)
Organism Homo sapiens
Characteristics antibody: Control
tissue_type: gastroesophageal sphincter
biomaterial_type: tissue
biosample encode accession: ENCBS057FSI (SAMN07790773)
Sex: male
lab: Richard Myers, HAIB
age: 37 year
donor_id: ENCDO845WKR
dev stage: adult
link: ENCBS057FSI at ENCODE; https://www.encodeproject.org/ENCBS057FSI/
link: derived from ENCODE donor ENCDO845WKR; https://www.encodeproject.org/ENCDO845WKR/
link: general protocol; https://www.encodeproject.org/documents/a3ee0bcf-48e3-4173-a23e-28a370090f00/@@download/attachment/ENCDO845WKR_collection_times.pdf
link: data sheet; https://www.encodeproject.org/documents/c530ba5c-4343-49bc-898b-5579c287a67e/@@download/attachment/image%20to%20tissue%20mapping%20public.pdf
Extracted molecule genomic DNA
Extraction protocol extraction method: see document
 
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina HiSeq 2000
 
Description https://www.encodeproject.org/experiments/ENCSR976KYQ/
***************
biological replicate number: 1
technical replicate number: 1
description: Chip-Seq on -human (fragmentation date:Tue Sep 20 2016 00:00:00 GMT-0500 (CDT)
experiment encode accession: ENCSR976KYQ
assay title: ChIP-seq
encode release date: 2017-02-02
lab: Richard Myers, HAIB
library encode accession: ENCLB589WEA
Data processing See GSM*_README.txt supplementary file linked below
 
Submission date Oct 23, 2017
Last update date May 15, 2019
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platform ID GPL11154
Series (1)
GSE105965 ChIP-seq from gastroesophageal sphincter (ENCSR976KYQ)
Relations
BioSample SAMN07790773
SRA SRX3322925

Supplementary file Size Download File type/resource
GSM2828837_ENCLB589WEA_README.txt.gz 320 b (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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