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GEO accession:
Sample GSM2828631
Query DataSets for GSM2828631
Status
Public on Oct 24, 2017
Title
ChIP-seq from 22Rv1 (ENCLB527PRR)
Sample type
SRA
Source name
Homo sapiens 22Rv1 immortalized cell line
Organism
Homo sapiens
Characteristics
antibody: Control
line: 22Rv1
biomaterial_type: immortalized cell line
biosample encode accession: ENCBS822DIG (SAMN07791225)
Sex: not collected
lab: Michael Snyder, Stanford
health state: carcinoma (prostate)
age: unknown
dev stage: unknown
link: ENCBS822DIG at ENCODE;
https://www.encodeproject.org/ENCBS822DIG/
link: derived from ENCODE donor ENCDO719HIY;
https://www.encodeproject.org/ENCDO719HIY/
link: growth protocol;
https://www.encodeproject.org/documents/5cb20f3d-c221-4455-9537-9df000451381/@@download/attachment/22Rv1_Cell_Culture_Farnham_150923.pdf
Extracted molecule
genomic DNA
Extraction protocol
not provided
Library strategy
ChIP-Seq
Library source
genomic
Library selection
ChIP
Instrument model
Illumina HiSeq 2000
Description
https://www.encodeproject.org/experiments/ENCSR933UGQ/
***************
biological replicate number: 2
technical replicate number: 1
description: ChIP-seq on human 22Rv1
experiment encode accession: ENCSR933UGQ
assay title: ChIP-seq
encode release date: 2016-11-30
lab: Michael Snyder, Stanford
library encode accession: ENCLB527PRR
size range: 450-650
Data processing
See GSM*_README.txt supplementary file linked below
Submission date
Oct 23, 2017
Last update date
May 15, 2019
Contact name
ENCODE DCC
E-mail(s)
encode-help@lists.stanford.edu
Organization name
ENCODE DCC
Street address
300 Pasteur Dr
City
Stanford
State/province
CA
ZIP/Postal code
94305-5120
Country
USA
Platform ID
GPL11154
Series (1)
GSE105888
ChIP-seq from 22Rv1 (ENCSR933UGQ)
Relations
BioSample
SAMN07791225
SRA
SRX3322852
Supplementary file
Size
Download
File type/resource
GSM2828631_ENCLB527PRR_README.txt.gz
320 b
(ftp)
(http)
TXT
SRA Run Selector
Raw data are available in SRA
Processed data provided as supplementary file
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