|
| Status |
Public on Oct 24, 2017 |
| Title |
ChIP-seq from VCaP (ENCLB244AHP) |
| Sample type |
SRA |
| |
|
| Source name |
Homo sapiens VCaP immortalized cell line
|
| Organism |
Homo sapiens |
| Characteristics |
antibody: Control
line: VCaP
biomaterial_type: immortalized cell line
biosample encode accession: ENCBS316RCQ (SAMN07790925)
Sex: male
lab: Michael Snyder, Stanford
health state: prostate adenocarcinoma
age: 50 year
dev stage: adult
link: ENCBS316RCQ at ENCODE; https://www.encodeproject.org/ENCBS316RCQ/
link: derived from ENCODE donor ENCDO000ACX; https://www.encodeproject.org/ENCDO000ACX/
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
not provided
|
| |
|
| Library strategy |
ChIP-Seq |
| Library source |
genomic |
| Library selection |
ChIP |
| Instrument model |
Illumina HiSeq 2000 |
| |
|
| Description |
https://www.encodeproject.org/experiments/ENCSR716BTZ/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on human VCaP
experiment encode accession: ENCSR716BTZ
assay title: ChIP-seq
encode release date: 2017-04-10
lab: Michael Snyder, Stanford
library encode accession: ENCLB244AHP
size range: 450-650
|
| Data processing |
See GSM*_README.txt supplementary file linked below
|
| |
|
| Submission date |
Oct 23, 2017 |
| Last update date |
May 15, 2019 |
| Contact name |
ENCODE DCC |
| E-mail(s) |
encode-help@lists.stanford.edu
|
| Organization name |
ENCODE DCC
|
| Street address |
300 Pasteur Dr
|
| City |
Stanford |
| State/province |
CA |
| ZIP/Postal code |
94305-5120 |
| Country |
USA |
| |
|
| Platform ID |
GPL11154 |
| Series (1) |
|
| Relations |
| BioSample |
SAMN07790925 |
| SRA |
SRX3322738 |
