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Sample GSM2827399

Query DataSets for GSM2827399

Status

Public on Oct 23, 2017

Title

ChIP-seq from testis (ENCLB037GMV)

Sample type

SRA

Source name

Homo sapiens testis tissue male adult (37 years)

Organism

Homo sapiens

Characteristics

antibody: Control
tissue_type: testis
biomaterial_type: tissue
biosample encode accession: ENCBS538CDU (SAMN07791051)
Sex: male
lab: Richard Myers, HAIB
age: 37 year
donor_id: ENCDO845WKR
dev stage: adult
link: ENCBS538CDU at ENCODE; https://www.encodeproject.org/ENCBS538CDU/
link: derived from ENCODE donor ENCDO845WKR; https://www.encodeproject.org/ENCDO845WKR/
link: general protocol; https://www.encodeproject.org/documents/a3ee0bcf-48e3-4173-a23e-28a370090f00/@@download/attachment/ENCDO845WKR_collection_times.pdf
link: data sheet; https://www.encodeproject.org/documents/c530ba5c-4343-49bc-898b-5579c287a67e/@@download/attachment/image%20to%20tissue%20mapping%20public.pdf

Extracted molecule

genomic DNA

Extraction protocol

extraction method: see document

Library strategy

ChIP-Seq

Library source

genomic

Library selection

ChIP

Instrument model

Illumina HiSeq 2000

Description

https://www.encodeproject.org/experiments/ENCSR666SXC/
***************
biological replicate number: 1
technical replicate number: 1
description: Chip-Seq on -human (fragmentation date:Thu Nov 03 2016 23:00:00 GMT-0600 (CST)
experiment encode accession: ENCSR666SXC
assay title: ChIP-seq
encode release date: 2017-02-02
lab: Richard Myers, HAIB
library encode accession: ENCLB037GMV

Data processing

See GSM*_README.txt supplementary file linked below

Submission date

Oct 21, 2017

Last update date

May 15, 2019

Contact name

ENCODE DCC

E-mail(s)

encode-help@lists.stanford.edu

Organization name

ENCODE DCC

Street address

300 Pasteur Dr

City

Stanford

State/province

ZIP/Postal code

94305-5120

Country

USA

Platform ID

GPL11154

Series (1)

GSE105621

ChIP-seq from testis (ENCSR666SXC)

Relations

BioSample

SAMN07791051

SRA

SRX3322457

Supplementary file	Size	Download	File type/resource
GSM2827399_ENCLB037GMV_README.txt.gz	321 b	(ftp)(http)	TXT
SRA Run Selector
Raw data are available in SRA
Processed data provided as supplementary file