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GEO accession:
Sample GSM2827322
Query DataSets for GSM2827322
Status
Public on Oct 23, 2017
Title
ChIP-seq from sigmoid colon (ENCLB751RUR)
Sample type
SRA
Source name
Homo sapiens sigmoid colon tissue female adult (51 year)
Organism
Homo sapiens
Characteristics
antibody: Control
tissue_type: sigmoid colon
biomaterial_type: tissue
biosample encode accession: ENCBS538MFJ (SAMN07791053)
Sex: female
lab: Richard Myers, HAIB
age: 51 year
donor_id: ENCDO271OUW
dev stage: adult
link: ENCBS538MFJ at ENCODE;
https://www.encodeproject.org/ENCBS538MFJ/
link: derived from ENCODE donor ENCDO271OUW;
https://www.encodeproject.org/ENCDO271OUW/
link: high resolution pathology slide image;
https://www.encodeproject.org/documents/76821021-0729-4f4a-8283-353359136254/@@download/attachment/84281.svs
link: data sheet;
https://www.encodeproject.org/documents/40ac95fd-dcb1-4172-9163-a32fdde3a101/@@download/attachment/Encode%20Public%20IDs.pdf
Extracted molecule
genomic DNA
Extraction protocol
extraction method: see document
Library strategy
ChIP-Seq
Library source
genomic
Library selection
ChIP
Instrument model
Illumina HiSeq 2000
Description
https://www.encodeproject.org/experiments/ENCSR509RYG/
***************
biological replicate number: 1
technical replicate number: 1
description: Chip-Seq on -human (fragmentation date:Mon Sep 19 2016 00:00:00 GMT-0500 (CDT)
experiment encode accession: ENCSR509RYG
assay title: ChIP-seq
encode release date: 2017-06-15
lab: Richard Myers, HAIB
library encode accession: ENCLB751RUR
Data processing
See GSM*_README.txt supplementary file linked below
Submission date
Oct 20, 2017
Last update date
May 15, 2019
Contact name
ENCODE DCC
E-mail(s)
encode-help@lists.stanford.edu
Organization name
ENCODE DCC
Street address
300 Pasteur Dr
City
Stanford
State/province
CA
ZIP/Postal code
94305-5120
Country
USA
Platform ID
GPL11154
Series (1)
GSE105571
ChIP-seq from sigmoid colon (ENCSR509RYG)
Relations
BioSample
SAMN07791053
SRA
SRX3322401
Supplementary file
Size
Download
File type/resource
GSM2827322_ENCLB751RUR_README.txt.gz
324 b
(ftp)
(http)
TXT
SRA Run Selector
Raw data are available in SRA
Processed data provided as supplementary file
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