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GEO accession:
Sample GSM2827261
Query DataSets for GSM2827261
Status
Public on Oct 23, 2017
Title
ChIP-seq from subcutaneous adipose tissue (ENCLB602RJA)
Sample type
SRA
Source name
Homo sapiens subcutaneous adipose tissue male adult (37 years)
Organism
Homo sapiens
Characteristics
antibody: Control
tissue_type: subcutaneous adipose tissue
biomaterial_type: tissue
biosample encode accession: ENCBS096VAL (SAMN07790794)
Sex: male
lab: Richard Myers, HAIB
age: 37 year
donor_id: ENCDO845WKR
dev stage: adult
link: ENCBS096VAL at ENCODE;
https://www.encodeproject.org/ENCBS096VAL/
link: derived from ENCODE donor ENCDO845WKR;
https://www.encodeproject.org/ENCDO845WKR/
link: general protocol;
https://www.encodeproject.org/documents/a3ee0bcf-48e3-4173-a23e-28a370090f00/@@download/attachment/ENCDO845WKR_collection_times.pdf
link: data sheet;
https://www.encodeproject.org/documents/c530ba5c-4343-49bc-898b-5579c287a67e/@@download/attachment/image%20to%20tissue%20mapping%20public.pdf
Extracted molecule
genomic DNA
Extraction protocol
extraction method: see document
Library strategy
ChIP-Seq
Library source
genomic
Library selection
ChIP
Instrument model
Illumina HiSeq 2000
Description
https://www.encodeproject.org/experiments/ENCSR622ZDY/
***************
biological replicate number: 1
technical replicate number: 1
description: Chip-Seq on -human (fragmentation date:Tue Aug 30 2016 00:00:00 GMT-0500 (CDT)
experiment encode accession: ENCSR622ZDY
assay title: ChIP-seq
encode release date: 2016-11-09
lab: Richard Myers, HAIB
library encode accession: ENCLB602RJA
Data processing
See GSM*_README.txt supplementary file linked below
Submission date
Oct 20, 2017
Last update date
May 15, 2019
Contact name
ENCODE DCC
E-mail(s)
encode-help@lists.stanford.edu
Organization name
ENCODE DCC
Street address
300 Pasteur Dr
City
Stanford
State/province
CA
ZIP/Postal code
94305-5120
Country
USA
Platform ID
GPL11154
Series (1)
GSE105533
ChIP-seq from subcutaneous adipose tissue (ENCSR622ZDY)
Relations
BioSample
SAMN07790794
SRA
SRX3322318
Supplementary file
Size
Download
File type/resource
GSM2827261_ENCLB602RJA_README.txt.gz
321 b
(ftp)
(http)
TXT
SRA Run Selector
Raw data are available in SRA
Processed data provided as supplementary file
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