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GEO accession:
Sample GSM2825581
Query DataSets for GSM2825581
Status
Public on Oct 20, 2017
Title
ChIP-seq from RWPE1 (ENCLB495RTI)
Sample type
SRA
Source name
Homo sapiens RWPE1 immortalized cell line
Organism
Homo sapiens
Characteristics
antibody: Control
line: RWPE1
biomaterial_type: immortalized cell line
biosample encode accession: ENCBS192LWI (SAMN07790847)
Sex: male
lab: Michael Snyder, Stanford
health state: normal
age: 54 year
dev stage: adult
link: ENCBS192LWI at ENCODE;
https://www.encodeproject.org/ENCBS192LWI/
link: derived from ENCODE donor ENCDO000ADM;
https://www.encodeproject.org/ENCDO000ADM/
link: growth protocol;
https://www.encodeproject.org/documents/962eab51-1b90-46c2-88f8-c9aecacb2d3f/@@download/attachment/RWPE-1_Cell_Culture_Farnham_150923.pdf
Extracted molecule
genomic DNA
Extraction protocol
not provided
Library strategy
ChIP-Seq
Library source
genomic
Library selection
ChIP
Instrument model
Illumina HiSeq 4000
Description
https://www.encodeproject.org/experiments/ENCSR248IFK/
***************
biological replicate number: 1
technical replicate number: 1
description: ChIP-seq on human RWPE1
experiment encode accession: ENCSR248IFK
assay title: ChIP-seq
encode release date: 2017-03-16
lab: Michael Snyder, Stanford
library encode accession: ENCLB495RTI
size range: 450-650
Data processing
See GSM*_README.txt supplementary file linked below
Submission date
Oct 20, 2017
Last update date
May 15, 2019
Contact name
ENCODE DCC
E-mail(s)
encode-help@lists.stanford.edu
Organization name
ENCODE DCC
Street address
300 Pasteur Dr
City
Stanford
State/province
CA
ZIP/Postal code
94305-5120
Country
USA
Platform ID
GPL20301
Series (1)
GSE105387
ChIP-seq from RWPE1 (ENCSR248IFK)
Relations
BioSample
SAMN07790847
SRA
SRX3322109
Supplementary file
Size
Download
File type/resource
GSM2825581_ENCLB495RTI_README.txt.gz
320 b
(ftp)
(http)
TXT
SRA Run Selector
Raw data are available in SRA
Processed data provided as supplementary file
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